Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 AC130686.1-201ENST00000622936 2466 ntBASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 FO393414.2-201ENST00000405153 598 ntBASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 LBH-204ENST00000406087 559 ntTSL 4 BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 AL353705.2-201ENST00000428243 662 ntBASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 AC079140.1-201ENST00000508039 487 ntBASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 RARRES2P9-201ENST00000565168 469 ntBASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 AC106730.1-201ENST00000566722 1090 ntBASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 SLC25A6P4-201ENST00000586535 553 ntBASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 AC026120.1-201ENST00000611536 926 ntBASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 MAPT-IT1-201ENST00000624111 3016 ntBASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 AC027612.1-201ENST00000445234 2395 ntBASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 HLA-A-201ENST00000376802 1334 ntBASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 KRT8P22-201ENST00000562317 1415 ntBASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 CIC-204ENST00000572681 8218 ntTSL 5 BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 ADH5P3-201ENST00000433842 1137 ntBASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 FAM58CP-201ENST00000435741 640 ntBASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 RPL13AP23-201ENST00000480739 586 ntBASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 LINC01225-203ENST00000563550 1244 ntBASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC10.07□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms