Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 ST20-AS1-201ENST00000560255 4223 ntBASIC13.13□□□□□ -0.31
CDH20Q9HBT6 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.13□□□□□ -0.31
CDH20Q9HBT6 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.13□□□□□ -0.31
CDH20Q9HBT6 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDH20Q9HBT6 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 ACE3P-201ENST00000423435 1973 ntBASIC13.12□□□□□ -0.31
CDH20Q9HBT6 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 TPM3P8-201ENST00000330554 643 ntBASIC13.12□□□□□ -0.31
CDH20Q9HBT6 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms