Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 POM121L9P-203ENST00000441984 1285 ntBASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 AC092658.1-201ENST00000505836 891 ntBASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.52□□□□□ -0.4
SSBP3Q9BWW4 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SSBP3Q9BWW4 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SSBP3Q9BWW4 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SSBP3Q9BWW4 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SSBP3Q9BWW4 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC12.52□□□□□ -0.4
SSBP3Q9BWW4 MROH4P-201ENST00000431302 1578 ntBASIC12.52□□□□□ -0.4
SSBP3Q9BWW4 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
SSBP3Q9BWW4 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SSBP3Q9BWW4 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
SSBP3Q9BWW4 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SSBP3Q9BWW4 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SSBP3Q9BWW4 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.52□□□□□ -0.4
SSBP3Q9BWW4 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 OLR1-203ENST00000432556 950 ntTSL 2 BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 RIT1-205ENST00000539040 919 ntTSL 2 BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 MIR6799-201ENST00000620297 69 ntBASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
SSBP3Q9BWW4 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 AC023908.3-201ENST00000564211 3047 ntBASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms