Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC22.65■■□□□ 1.22
CASKIN1Q8WXD9 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
CASKIN1Q8WXD9 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
CASKIN1Q8WXD9 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CASKIN1Q8WXD9 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CASKIN1Q8WXD9 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CASKIN1Q8WXD9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
CASKIN1Q8WXD9 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CASKIN1Q8WXD9 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
CASKIN1Q8WXD9 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC22.65■■□□□ 1.22
CASKIN1Q8WXD9 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC22.65■■□□□ 1.22
CASKIN1Q8WXD9 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC22.65■■□□□ 1.22
CASKIN1Q8WXD9 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CASKIN1Q8WXD9 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC22.65■■□□□ 1.22
CASKIN1Q8WXD9 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CASKIN1Q8WXD9 POLD4-208ENST00000532830 904 ntTSL 3 BASIC22.65■■□□□ 1.22
CASKIN1Q8WXD9 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC22.65■■□□□ 1.22
CASKIN1Q8WXD9 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC22.65■■□□□ 1.22
CASKIN1Q8WXD9 AC021016.3-201ENST00000608367 477 ntBASIC22.65■■□□□ 1.22
CASKIN1Q8WXD9 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
CASKIN1Q8WXD9 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CASKIN1Q8WXD9 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
CASKIN1Q8WXD9 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CASKIN1Q8WXD9 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC22.64■■□□□ 1.22
CASKIN1Q8WXD9 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC22.64■■□□□ 1.22
CASKIN1Q8WXD9 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC22.64■■□□□ 1.22
CASKIN1Q8WXD9 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CASKIN1Q8WXD9 LINC00554-201ENST00000564841 3011 ntBASIC22.64■■□□□ 1.22
CASKIN1Q8WXD9 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC22.64■■□□□ 1.22
CASKIN1Q8WXD9 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CASKIN1Q8WXD9 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CASKIN1Q8WXD9 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CASKIN1Q8WXD9 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC22.64■■□□□ 1.21
CASKIN1Q8WXD9 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
CASKIN1Q8WXD9 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
CASKIN1Q8WXD9 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CASKIN1Q8WXD9 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CASKIN1Q8WXD9 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CASKIN1Q8WXD9 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC22.64■■□□□ 1.21
CASKIN1Q8WXD9 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC22.64■■□□□ 1.21
CASKIN1Q8WXD9 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC22.64■■□□□ 1.21
CASKIN1Q8WXD9 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC22.64■■□□□ 1.21
CASKIN1Q8WXD9 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CASKIN1Q8WXD9 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC22.64■■□□□ 1.21
CASKIN1Q8WXD9 MIR4750-201ENST00000584564 56 ntBASIC22.64■■□□□ 1.21
CASKIN1Q8WXD9 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC22.64■■□□□ 1.21
CASKIN1Q8WXD9 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CASKIN1Q8WXD9 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CASKIN1Q8WXD9 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC22.63■■□□□ 1.21
CASKIN1Q8WXD9 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CASKIN1Q8WXD9 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CASKIN1Q8WXD9 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CASKIN1Q8WXD9 AC104640.1-201ENST00000562617 2109 ntBASIC22.63■■□□□ 1.21
CASKIN1Q8WXD9 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CASKIN1Q8WXD9 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
CASKIN1Q8WXD9 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
CASKIN1Q8WXD9 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
CASKIN1Q8WXD9 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CASKIN1Q8WXD9 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CASKIN1Q8WXD9 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CASKIN1Q8WXD9 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
CASKIN1Q8WXD9 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
CASKIN1Q8WXD9 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CASKIN1Q8WXD9 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
CASKIN1Q8WXD9 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CASKIN1Q8WXD9 AC073869.2-201ENST00000417338 1026 ntBASIC22.63■■□□□ 1.21
CASKIN1Q8WXD9 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CASKIN1Q8WXD9 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC22.63■■□□□ 1.21
CASKIN1Q8WXD9 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC22.63■■□□□ 1.21
CASKIN1Q8WXD9 MBP-227ENST00000526111 581 ntTSL 4 BASIC22.63■■□□□ 1.21
CASKIN1Q8WXD9 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
CASKIN1Q8WXD9 MT3-203ENST00000565838 421 ntTSL 3 BASIC22.63■■□□□ 1.21
CASKIN1Q8WXD9 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC22.63■■□□□ 1.21
CASKIN1Q8WXD9 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC22.63■■□□□ 1.21
CASKIN1Q8WXD9 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
CASKIN1Q8WXD9 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC22.63■■□□□ 1.21
CASKIN1Q8WXD9 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CASKIN1Q8WXD9 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CASKIN1Q8WXD9 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CASKIN1Q8WXD9 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC22.63■■□□□ 1.21
CASKIN1Q8WXD9 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
CASKIN1Q8WXD9 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC22.63■■□□□ 1.21
CASKIN1Q8WXD9 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CASKIN1Q8WXD9 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC22.62■■□□□ 1.21
CASKIN1Q8WXD9 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CASKIN1Q8WXD9 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CASKIN1Q8WXD9 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
CASKIN1Q8WXD9 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CASKIN1Q8WXD9 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
CASKIN1Q8WXD9 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
CASKIN1Q8WXD9 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CASKIN1Q8WXD9 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
CASKIN1Q8WXD9 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC22.62■■□□□ 1.21
CASKIN1Q8WXD9 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CASKIN1Q8WXD9 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CASKIN1Q8WXD9 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CASKIN1Q8WXD9 RPL7P35-201ENST00000446943 740 ntBASIC22.62■■□□□ 1.21
CASKIN1Q8WXD9 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC22.62■■□□□ 1.21
CASKIN1Q8WXD9 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC22.62■■□□□ 1.21
CASKIN1Q8WXD9 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms