Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC15.11■□□□□ 0.01
PRUNE2Q8WUY3 RN7SL478P-201ENST00000584358 298 ntBASIC15.11■□□□□ 0.01
PRUNE2Q8WUY3 ACTBP9-201ENST00000587663 1099 ntBASIC15.11■□□□□ 0.01
PRUNE2Q8WUY3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRUNE2Q8WUY3 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 AC008741.2-201ENST00000612792 3115 ntBASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 AC069224.1-201ENST00000566372 1715 ntBASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 AC131206.1-201ENST00000538078 1211 ntBASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 AL132994.1-201ENST00000554098 400 ntBASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 AC138627.1-201ENST00000641127 1257 ntBASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 SALL4P5-201ENST00000419001 1760 ntBASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRUNE2Q8WUY3 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.09■□□□□ 0.01
PRUNE2Q8WUY3 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC15.09■□□□□ 0.01
PRUNE2Q8WUY3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
PRUNE2Q8WUY3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PRUNE2Q8WUY3 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.09■□□□□ 0.01
PRUNE2Q8WUY3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRUNE2Q8WUY3 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PRUNE2Q8WUY3 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRUNE2Q8WUY3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRUNE2Q8WUY3 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PRUNE2Q8WUY3 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRUNE2Q8WUY3 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PRUNE2Q8WUY3 AC112220.4-201ENST00000604982 1263 ntBASIC15.09■□□□□ 0.01
PRUNE2Q8WUY3 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRUNE2Q8WUY3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.09■□□□□ 0.01
PRUNE2Q8WUY3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRUNE2Q8WUY3 AC084018.2-201ENST00000613093 2607 ntBASIC15.09■□□□□ 0.01
PRUNE2Q8WUY3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRUNE2Q8WUY3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRUNE2Q8WUY3 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PRUNE2Q8WUY3 RN7SL530P-201ENST00000485097 298 ntBASIC15.09■□□□□ 0.01
PRUNE2Q8WUY3 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC15.09■□□□□ 0.01
PRUNE2Q8WUY3 AC005746.2-201ENST00000585765 470 ntTSL 5 BASIC15.09■□□□□ 0.01
PRUNE2Q8WUY3 AC016582.2-202ENST00000587765 1094 ntBASIC15.09■□□□□ 0.01
PRUNE2Q8WUY3 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC15.09■□□□□ 0.01
PRUNE2Q8WUY3 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PRUNE2Q8WUY3 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.09■□□□□ 0.01
PRUNE2Q8WUY3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRUNE2Q8WUY3 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.09■□□□□ 0.01
PRUNE2Q8WUY3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRUNE2Q8WUY3 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
PRUNE2Q8WUY3 SSR4P1-203ENST00000599569 2260 ntBASIC15.09■□□□□ 0.01
PRUNE2Q8WUY3 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PRUNE2Q8WUY3 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
PRUNE2Q8WUY3 AL121949.1-201ENST00000402043 968 ntBASIC15.08■□□□□ 0.01
PRUNE2Q8WUY3 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC15.08■□□□□ 0.01
PRUNE2Q8WUY3 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PRUNE2Q8WUY3 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PRUNE2Q8WUY3 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC15.08■□□□□ 0.01
PRUNE2Q8WUY3 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
PRUNE2Q8WUY3 AP000920.1-201ENST00000531824 344 ntBASIC15.08■□□□□ 0.01
PRUNE2Q8WUY3 NAA40-205ENST00000539656 577 ntTSL 4 BASIC15.08■□□□□ 0.01
PRUNE2Q8WUY3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
PRUNE2Q8WUY3 IFNL3P1-201ENST00000595082 501 ntBASIC15.08■□□□□ 0.01
PRUNE2Q8WUY3 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC15.08■□□□□ 0.01
PRUNE2Q8WUY3 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PRUNE2Q8WUY3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.08■□□□□ 0.01
PRUNE2Q8WUY3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
PRUNE2Q8WUY3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
PRUNE2Q8WUY3 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.08■□□□□ 0
PRUNE2Q8WUY3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.08■□□□□ 0
PRUNE2Q8WUY3 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC15.08■□□□□ 0
PRUNE2Q8WUY3 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC15.08■□□□□ 0
PRUNE2Q8WUY3 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC15.08■□□□□ 0
PRUNE2Q8WUY3 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC15.08■□□□□ 0
PRUNE2Q8WUY3 RN7SL33P-201ENST00000462543 342 ntBASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms