Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 AL645937.2-201ENST00000396808 931 ntBASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 AC097065.1-201ENST00000425737 517 ntBASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 GHSR-202ENST00000427970 912 ntBASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 MIR4754-201ENST00000582477 89 ntBASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 AC005324.6-201ENST00000587972 613 ntBASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 AC005357.2-202ENST00000590507 1060 ntBASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 AC025271.4-201ENST00000621477 1726 ntBASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 RN7SKP214-201ENST00000364208 315 ntBASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 HNRNPA1P41-201ENST00000397777 928 ntBASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 GMFG-209ENST00000600322 622 ntTSL 5 BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 AL162426.1-201ENST00000624141 743 ntBASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 AC138035.3-201ENST00000622706 2791 ntBASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 AC009090.5-201ENST00000624886 2285 ntBASIC17.07■□□□□ 0.32
U2AF1L4Q8WU68 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
U2AF1L4Q8WU68 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.06■□□□□ 0.32
U2AF1L4Q8WU68 AC006486.2-201ENST00000624246 2199 ntBASIC17.06■□□□□ 0.32
U2AF1L4Q8WU68 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
U2AF1L4Q8WU68 AL109954.1-202ENST00000564051 2148 ntBASIC17.06■□□□□ 0.32
U2AF1L4Q8WU68 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.06■□□□□ 0.32
U2AF1L4Q8WU68 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
U2AF1L4Q8WU68 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
U2AF1L4Q8WU68 TBC1D3J-201ENST00000620719 1426 ntBASIC17.06■□□□□ 0.32
U2AF1L4Q8WU68 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.06■□□□□ 0.32
U2AF1L4Q8WU68 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
U2AF1L4Q8WU68 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.06■□□□□ 0.32
U2AF1L4Q8WU68 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
U2AF1L4Q8WU68 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
U2AF1L4Q8WU68 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
U2AF1L4Q8WU68 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
U2AF1L4Q8WU68 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
U2AF1L4Q8WU68 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
U2AF1L4Q8WU68 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
U2AF1L4Q8WU68 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.06■□□□□ 0.32
U2AF1L4Q8WU68 RPL18P13-201ENST00000478088 569 ntBASIC17.06■□□□□ 0.32
U2AF1L4Q8WU68 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
U2AF1L4Q8WU68 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC17.06■□□□□ 0.32
U2AF1L4Q8WU68 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms