Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 KLF2P2-201ENST00000416807 1039 ntBASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 AL096865.1-201ENST00000606796 927 ntBASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 SNX18-202ENST00000343017 3140 ntBASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 AC055811.4-201ENST00000624039 1754 ntBASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 AC092053.3-201ENST00000641308 4975 ntBASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 AC236430.1-201ENST00000402231 743 ntBASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 KRT18P25-201ENST00000508931 1278 ntBASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 SPCS2P1-201ENST00000561636 679 ntBASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 AC008494.3-201ENST00000606615 944 ntBASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP1Q8TDR0 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAF3IP1Q8TDR0 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRAF3IP1Q8TDR0 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms