Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 AC117489.1-201ENST00000625169 3217 ntBASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 AC005229.1-201ENST00000392885 409 ntBASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 AC092933.1-201ENST00000393644 945 ntBASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 AC025279.2-201ENST00000569730 653 ntBASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 AL512343.1-201ENST00000605837 169 ntBASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 AC027601.5-201ENST00000624065 2482 ntBASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PCDH19Q8TAB3 AC092135.3-201ENST00000624151 1846 ntBASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 AL136172.1-201ENST00000598590 1394 ntBASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 AL355864.2-201ENST00000447420 863 ntBASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 BCRP2-202ENST00000447763 634 ntBASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 AC022210.1-201ENST00000449856 793 ntBASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 AL391280.1-201ENST00000506969 1062 ntBASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 GCOM2-201ENST00000509133 1104 ntBASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 BCRP6-201ENST00000510112 632 ntBASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 BCRP7-201ENST00000511549 544 ntBASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms