Protein–RNA interactions for Protein: Q8NE01

CNNM3, Metal transporter CNNM3, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3Q8NE01 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNNM3Q8NE01 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNNM3Q8NE01 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNNM3Q8NE01 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNNM3Q8NE01 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNNM3Q8NE01 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNNM3Q8NE01 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CNNM3Q8NE01 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNNM3Q8NE01 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC17.11■□□□□ 0.33
CNNM3Q8NE01 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CNNM3Q8NE01 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNNM3Q8NE01 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNNM3Q8NE01 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC17.11■□□□□ 0.33
CNNM3Q8NE01 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC17.11■□□□□ 0.33
CNNM3Q8NE01 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNNM3Q8NE01 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.11■□□□□ 0.33
CNNM3Q8NE01 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNNM3Q8NE01 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNNM3Q8NE01 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNNM3Q8NE01 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.1■□□□□ 0.33
CNNM3Q8NE01 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNNM3Q8NE01 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CNNM3Q8NE01 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNNM3Q8NE01 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CNNM3Q8NE01 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CNNM3Q8NE01 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNNM3Q8NE01 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNNM3Q8NE01 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNNM3Q8NE01 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CNNM3Q8NE01 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.1■□□□□ 0.33
CNNM3Q8NE01 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNNM3Q8NE01 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.1■□□□□ 0.33
CNNM3Q8NE01 HLA-K-203ENST00000430151 1046 ntBASIC17.1■□□□□ 0.33
CNNM3Q8NE01 AC026410.3-201ENST00000514280 936 ntBASIC17.1■□□□□ 0.33
CNNM3Q8NE01 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.1■□□□□ 0.33
CNNM3Q8NE01 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.1■□□□□ 0.33
CNNM3Q8NE01 AC010319.3-201ENST00000597028 470 ntBASIC17.1■□□□□ 0.33
CNNM3Q8NE01 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CNNM3Q8NE01 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNNM3Q8NE01 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.1■□□□□ 0.33
CNNM3Q8NE01 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CNNM3Q8NE01 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC17.1■□□□□ 0.33
CNNM3Q8NE01 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNNM3Q8NE01 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CNNM3Q8NE01 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNNM3Q8NE01 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNNM3Q8NE01 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNNM3Q8NE01 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNNM3Q8NE01 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNNM3Q8NE01 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNNM3Q8NE01 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
CNNM3Q8NE01 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNNM3Q8NE01 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNNM3Q8NE01 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CNNM3Q8NE01 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC17.09■□□□□ 0.33
CNNM3Q8NE01 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNNM3Q8NE01 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNNM3Q8NE01 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNNM3Q8NE01 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.09■□□□□ 0.33
CNNM3Q8NE01 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNNM3Q8NE01 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CNNM3Q8NE01 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CNNM3Q8NE01 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNNM3Q8NE01 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.09■□□□□ 0.33
CNNM3Q8NE01 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CNNM3Q8NE01 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.09■□□□□ 0.33
CNNM3Q8NE01 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.09■□□□□ 0.33
CNNM3Q8NE01 ACA64.2-201ENST00000459014 129 ntBASIC17.09■□□□□ 0.33
CNNM3Q8NE01 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.09■□□□□ 0.33
CNNM3Q8NE01 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.09■□□□□ 0.33
CNNM3Q8NE01 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
CNNM3Q8NE01 AL049840.4-201ENST00000602422 811 ntBASIC17.09■□□□□ 0.33
CNNM3Q8NE01 CU634019.7-201ENST00000624153 1185 ntBASIC17.09■□□□□ 0.33
CNNM3Q8NE01 FP236241.2-201ENST00000624906 1185 ntBASIC17.09■□□□□ 0.33
CNNM3Q8NE01 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.09■□□□□ 0.33
CNNM3Q8NE01 AC018665.1-201ENST00000622927 1362 ntBASIC17.09■□□□□ 0.33
CNNM3Q8NE01 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.09■□□□□ 0.33
CNNM3Q8NE01 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CNNM3Q8NE01 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNNM3Q8NE01 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNNM3Q8NE01 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.09■□□□□ 0.33
CNNM3Q8NE01 AC023090.2-201ENST00000625182 2110 ntBASIC17.09■□□□□ 0.33
CNNM3Q8NE01 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CNNM3Q8NE01 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNNM3Q8NE01 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNNM3Q8NE01 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CNNM3Q8NE01 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNNM3Q8NE01 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNNM3Q8NE01 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNNM3Q8NE01 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CNNM3Q8NE01 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNNM3Q8NE01 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CNNM3Q8NE01 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CNNM3Q8NE01 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CNNM3Q8NE01 CNTNAP3P2-201ENST00000617175 3861 ntBASIC17.08■□□□□ 0.33
CNNM3Q8NE01 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CNNM3Q8NE01 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CNNM3Q8NE01 AC027601.5-201ENST00000624065 2482 ntBASIC17.08■□□□□ 0.33
CNNM3Q8NE01 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.08■□□□□ 0.33
CNNM3Q8NE01 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms