Protein–RNA interactions for Protein: Q8N815

CNTD1, Cyclin N-terminal domain-containing protein 1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTD1Q8N815 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CNTD1Q8N815 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CNTD1Q8N815 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CNTD1Q8N815 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNTD1Q8N815 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.21■□□□□ 0.03
CNTD1Q8N815 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CNTD1Q8N815 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.21■□□□□ 0.03
CNTD1Q8N815 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNTD1Q8N815 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNTD1Q8N815 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.21■□□□□ 0.03
CNTD1Q8N815 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.21■□□□□ 0.02
CNTD1Q8N815 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CNTD1Q8N815 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CNTD1Q8N815 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.21■□□□□ 0.02
CNTD1Q8N815 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.21■□□□□ 0.02
CNTD1Q8N815 MYO15B-237ENST00000642007 4893 ntBASIC15.21■□□□□ 0.02
CNTD1Q8N815 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
CNTD1Q8N815 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CNTD1Q8N815 AL161772.1-201ENST00000610494 4412 ntBASIC15.2■□□□□ 0.02
CNTD1Q8N815 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNTD1Q8N815 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNTD1Q8N815 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNTD1Q8N815 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNTD1Q8N815 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNTD1Q8N815 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CNTD1Q8N815 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNTD1Q8N815 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CNTD1Q8N815 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CNTD1Q8N815 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CNTD1Q8N815 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CNTD1Q8N815 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CNTD1Q8N815 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CNTD1Q8N815 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNTD1Q8N815 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CNTD1Q8N815 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.2■□□□□ 0.02
CNTD1Q8N815 CNN2P8-201ENST00000421872 913 ntBASIC15.2■□□□□ 0.02
CNTD1Q8N815 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.2■□□□□ 0.02
CNTD1Q8N815 FAM197Y7-201ENST00000432892 766 ntBASIC15.2■□□□□ 0.02
CNTD1Q8N815 GAPDHP21-201ENST00000450301 1010 ntBASIC15.2■□□□□ 0.02
CNTD1Q8N815 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CNTD1Q8N815 FTLP10-202ENST00000505798 471 ntBASIC15.2■□□□□ 0.02
CNTD1Q8N815 RNA5SP486-201ENST00000515961 83 ntBASIC15.2■□□□□ 0.02
CNTD1Q8N815 AP003171.2-201ENST00000528208 925 ntBASIC15.2■□□□□ 0.02
CNTD1Q8N815 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.2■□□□□ 0.02
CNTD1Q8N815 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.2■□□□□ 0.02
CNTD1Q8N815 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.2■□□□□ 0.02
CNTD1Q8N815 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CNTD1Q8N815 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.2■□□□□ 0.02
CNTD1Q8N815 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNTD1Q8N815 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNTD1Q8N815 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNTD1Q8N815 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNTD1Q8N815 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CNTD1Q8N815 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CNTD1Q8N815 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.2■□□□□ 0.02
CNTD1Q8N815 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CNTD1Q8N815 AC015656.1-201ENST00000624209 3578 ntBASIC15.2■□□□□ 0.02
CNTD1Q8N815 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNTD1Q8N815 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNTD1Q8N815 AC009093.2-202ENST00000620513 2079 ntBASIC15.2■□□□□ 0.02
CNTD1Q8N815 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CNTD1Q8N815 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNTD1Q8N815 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.19■□□□□ 0.02
CNTD1Q8N815 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CNTD1Q8N815 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CNTD1Q8N815 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNTD1Q8N815 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNTD1Q8N815 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNTD1Q8N815 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CNTD1Q8N815 FKBP4P6-201ENST00000457486 1332 ntBASIC15.19■□□□□ 0.02
CNTD1Q8N815 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.19■□□□□ 0.02
CNTD1Q8N815 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CNTD1Q8N815 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CNTD1Q8N815 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNTD1Q8N815 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNTD1Q8N815 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNTD1Q8N815 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNTD1Q8N815 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.19■□□□□ 0.02
CNTD1Q8N815 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNTD1Q8N815 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNTD1Q8N815 TPM3P8-201ENST00000330554 643 ntBASIC15.19■□□□□ 0.02
CNTD1Q8N815 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
CNTD1Q8N815 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNTD1Q8N815 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CNTD1Q8N815 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.19■□□□□ 0.02
CNTD1Q8N815 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.19■□□□□ 0.02
CNTD1Q8N815 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CNTD1Q8N815 AC016694.1-201ENST00000434179 700 ntBASIC15.19■□□□□ 0.02
CNTD1Q8N815 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.19■□□□□ 0.02
CNTD1Q8N815 KRT17P7-201ENST00000451704 1104 ntBASIC15.19■□□□□ 0.02
CNTD1Q8N815 CROCCP4-201ENST00000457096 498 ntBASIC15.19■□□□□ 0.02
CNTD1Q8N815 AC007551.1-201ENST00000457394 519 ntBASIC15.19■□□□□ 0.02
CNTD1Q8N815 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CNTD1Q8N815 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.19■□□□□ 0.02
CNTD1Q8N815 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.19■□□□□ 0.02
CNTD1Q8N815 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNTD1Q8N815 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNTD1Q8N815 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.19■□□□□ 0.02
CNTD1Q8N815 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNTD1Q8N815 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms