Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.34■□□□□ 0.05
SIX5Q8N196 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
SIX5Q8N196 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
SIX5Q8N196 AC234644.1-201ENST00000406065 370 ntBASIC15.34■□□□□ 0.05
SIX5Q8N196 AC097065.1-201ENST00000425737 517 ntBASIC15.34■□□□□ 0.05
SIX5Q8N196 PFN2-206ENST00000461930 606 ntTSL 4 BASIC15.34■□□□□ 0.05
SIX5Q8N196 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SIX5Q8N196 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.34■□□□□ 0.05
SIX5Q8N196 AL031713.1-201ENST00000564813 661 ntBASIC15.34■□□□□ 0.05
SIX5Q8N196 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC15.34■□□□□ 0.05
SIX5Q8N196 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SIX5Q8N196 AC242376.2-201ENST00000619355 883 ntBASIC15.34■□□□□ 0.05
SIX5Q8N196 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SIX5Q8N196 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
SIX5Q8N196 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.34■□□□□ 0.05
SIX5Q8N196 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SIX5Q8N196 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
SIX5Q8N196 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.34■□□□□ 0.05
SIX5Q8N196 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SIX5Q8N196 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.34■□□□□ 0.05
SIX5Q8N196 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SIX5Q8N196 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.34■□□□□ 0.05
SIX5Q8N196 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SIX5Q8N196 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.34■□□□□ 0.05
SIX5Q8N196 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SIX5Q8N196 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.34■□□□□ 0.05
SIX5Q8N196 PRAL-201ENST00000624952 3286 ntBASIC15.34■□□□□ 0.05
SIX5Q8N196 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.33■□□□□ 0.05
SIX5Q8N196 MIR600HG-201ENST00000449175 5984 ntBASIC15.33■□□□□ 0.05
SIX5Q8N196 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
SIX5Q8N196 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SIX5Q8N196 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
SIX5Q8N196 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SIX5Q8N196 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
SIX5Q8N196 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.33■□□□□ 0.05
SIX5Q8N196 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SIX5Q8N196 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SIX5Q8N196 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SIX5Q8N196 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.33■□□□□ 0.04
SIX5Q8N196 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SIX5Q8N196 REXO1L5P-201ENST00000622260 2098 ntBASIC15.33■□□□□ 0.04
SIX5Q8N196 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.33■□□□□ 0.04
SIX5Q8N196 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SIX5Q8N196 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SIX5Q8N196 AC239868.1-201ENST00000369385 493 ntBASIC15.33■□□□□ 0.04
SIX5Q8N196 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
SIX5Q8N196 OR2K2-202ENST00000374428 1038 ntBASIC15.33■□□□□ 0.04
SIX5Q8N196 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
SIX5Q8N196 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC15.33■□□□□ 0.04
SIX5Q8N196 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC15.33■□□□□ 0.04
SIX5Q8N196 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SIX5Q8N196 RPL8P2-201ENST00000430538 502 ntBASIC15.33■□□□□ 0.04
SIX5Q8N196 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC15.33■□□□□ 0.04
SIX5Q8N196 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SIX5Q8N196 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.33■□□□□ 0.04
SIX5Q8N196 AC090142.2-201ENST00000483263 416 ntBASIC15.33■□□□□ 0.04
SIX5Q8N196 HLA-J-204ENST00000495278 958 ntBASIC15.33■□□□□ 0.04
SIX5Q8N196 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC15.33■□□□□ 0.04
SIX5Q8N196 AC026434.2-201ENST00000506094 1078 ntBASIC15.33■□□□□ 0.04
SIX5Q8N196 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC15.33■□□□□ 0.04
SIX5Q8N196 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.33■□□□□ 0.04
SIX5Q8N196 DUX4L47-201ENST00000566374 394 ntBASIC15.33■□□□□ 0.04
SIX5Q8N196 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
SIX5Q8N196 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC15.33■□□□□ 0.04
SIX5Q8N196 MIR6756-201ENST00000616240 63 ntBASIC15.33■□□□□ 0.04
SIX5Q8N196 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SIX5Q8N196 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SIX5Q8N196 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SIX5Q8N196 CAP2P1-201ENST00000557743 1390 ntBASIC15.33■□□□□ 0.04
SIX5Q8N196 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SIX5Q8N196 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SIX5Q8N196 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.33■□□□□ 0.04
SIX5Q8N196 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SIX5Q8N196 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.33■□□□□ 0.04
SIX5Q8N196 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.33■□□□□ 0.04
SIX5Q8N196 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SIX5Q8N196 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SIX5Q8N196 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.33■□□□□ 0.04
SIX5Q8N196 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SIX5Q8N196 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIX5Q8N196 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SIX5Q8N196 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIX5Q8N196 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIX5Q8N196 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SIX5Q8N196 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.32■□□□□ 0.04
SIX5Q8N196 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.32■□□□□ 0.04
SIX5Q8N196 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIX5Q8N196 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.32■□□□□ 0.04
SIX5Q8N196 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIX5Q8N196 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.32■□□□□ 0.04
SIX5Q8N196 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIX5Q8N196 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
SIX5Q8N196 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC15.32■□□□□ 0.04
SIX5Q8N196 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SIX5Q8N196 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.32■□□□□ 0.04
SIX5Q8N196 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIX5Q8N196 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SIX5Q8N196 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SIX5Q8N196 MIR1227-201ENST00000408484 88 ntBASIC15.32■□□□□ 0.04
SIX5Q8N196 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms