Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.75□□□□□ -0.05
TRIM48Q8IWZ4 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
TRIM48Q8IWZ4 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.75□□□□□ -0.05
TRIM48Q8IWZ4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIM48Q8IWZ4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIM48Q8IWZ4 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 AC092658.1-201ENST00000505836 891 ntBASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 AL137783.1-201ENST00000623494 1896 ntBASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.74□□□□□ -0.05
TRIM48Q8IWZ4 KRT8P44-201ENST00000441609 1350 ntBASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 TUBB1P2-201ENST00000422712 1306 ntBASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 TUBB1P1-201ENST00000503144 1300 ntBASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 RN7SL560P-201ENST00000577943 264 ntBASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 MIR6799-201ENST00000620297 69 ntBASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.73□□□□□ -0.05
TRIM48Q8IWZ4 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms