Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPAS4Q8IUM7 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPAS4Q8IUM7 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
NPAS4Q8IUM7 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.83■□□□□ 0.13
NPAS4Q8IUM7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPAS4Q8IUM7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.83■□□□□ 0.13
NPAS4Q8IUM7 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.83■□□□□ 0.13
NPAS4Q8IUM7 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
NPAS4Q8IUM7 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPAS4Q8IUM7 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
NPAS4Q8IUM7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 RNA5SP359-201ENST00000364838 113 ntBASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 MIR557-201ENST00000385239 98 ntBASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 AL512430.1-201ENST00000392575 860 ntBASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 RPSAP15-201ENST00000448168 861 ntBASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 DUTP3-201ENST00000450025 415 ntBASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 AC079112.1-201ENST00000454972 939 ntBASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 AC003686.1-201ENST00000550956 1034 ntBASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 AC007881.3-201ENST00000608897 607 ntBASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 AL136172.1-201ENST00000598590 1394 ntBASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 AL590440.2-201ENST00000641973 1595 ntBASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS4Q8IUM7 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 OR2R1P-201ENST00000441404 914 ntBASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 CHCHD2P9-201ENST00000461726 456 ntBASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 SIGLEC18P-201ENST00000602271 909 ntBASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 KRT8P28-201ENST00000433288 1390 ntBASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 LINC01101-201ENST00000622953 1884 ntBASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms