Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB43Q86YS6 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
RAB43Q86YS6 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB43Q86YS6 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB43Q86YS6 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB43Q86YS6 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB43Q86YS6 KLF2P2-201ENST00000416807 1039 ntBASIC14.38□□□□□ -0.11
RAB43Q86YS6 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB43Q86YS6 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB43Q86YS6 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.38□□□□□ -0.11
RAB43Q86YS6 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB43Q86YS6 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB43Q86YS6 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.38□□□□□ -0.11
RAB43Q86YS6 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RAB43Q86YS6 RNA5SP486-201ENST00000515961 83 ntBASIC14.38□□□□□ -0.11
RAB43Q86YS6 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
RAB43Q86YS6 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB43Q86YS6 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.38□□□□□ -0.11
RAB43Q86YS6 AC078819.1-201ENST00000547454 765 ntBASIC14.38□□□□□ -0.11
RAB43Q86YS6 AC012085.1-201ENST00000548270 765 ntBASIC14.38□□□□□ -0.11
RAB43Q86YS6 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.38□□□□□ -0.11
RAB43Q86YS6 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.38□□□□□ -0.11
RAB43Q86YS6 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.38□□□□□ -0.11
RAB43Q86YS6 AC091271.1-201ENST00000611877 1162 ntBASIC14.38□□□□□ -0.11
RAB43Q86YS6 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB43Q86YS6 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB43Q86YS6 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB43Q86YS6 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB43Q86YS6 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB43Q86YS6 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RAB43Q86YS6 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB43Q86YS6 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
RAB43Q86YS6 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB43Q86YS6 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
RAB43Q86YS6 AC005252.3-201ENST00000623855 2258 ntBASIC14.38□□□□□ -0.11
RAB43Q86YS6 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB43Q86YS6 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB43Q86YS6 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB43Q86YS6 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB43Q86YS6 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB43Q86YS6 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB43Q86YS6 AC020907.1-201ENST00000616460 1350 ntBASIC14.37□□□□□ -0.11
RAB43Q86YS6 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB43Q86YS6 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB43Q86YS6 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
RAB43Q86YS6 LRRC59-203ENST00000576448 1531 ntBASIC14.37□□□□□ -0.11
RAB43Q86YS6 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RAB43Q86YS6 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RAB43Q86YS6 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RAB43Q86YS6 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB43Q86YS6 RNU1-114P-201ENST00000365297 166 ntBASIC14.37□□□□□ -0.11
RAB43Q86YS6 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
RAB43Q86YS6 AL645937.2-201ENST00000396808 931 ntBASIC14.37□□□□□ -0.11
RAB43Q86YS6 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.37□□□□□ -0.11
RAB43Q86YS6 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.37□□□□□ -0.11
RAB43Q86YS6 RPL13AP20-201ENST00000459725 609 ntBASIC14.37□□□□□ -0.11
RAB43Q86YS6 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB43Q86YS6 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB43Q86YS6 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB43Q86YS6 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB43Q86YS6 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.37□□□□□ -0.11
RAB43Q86YS6 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB43Q86YS6 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB43Q86YS6 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB43Q86YS6 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB43Q86YS6 MIR6787-201ENST00000616675 61 ntBASIC14.37□□□□□ -0.11
RAB43Q86YS6 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB43Q86YS6 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB43Q86YS6 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB43Q86YS6 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB43Q86YS6 AC005912.2-201ENST00000619492 2400 ntBASIC14.37□□□□□ -0.11
RAB43Q86YS6 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB43Q86YS6 AL390755.1-201ENST00000623716 2027 ntBASIC14.37□□□□□ -0.11
RAB43Q86YS6 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RAB43Q86YS6 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB43Q86YS6 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB43Q86YS6 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB43Q86YS6 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB43Q86YS6 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB43Q86YS6 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB43Q86YS6 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB43Q86YS6 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RAB43Q86YS6 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB43Q86YS6 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB43Q86YS6 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB43Q86YS6 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB43Q86YS6 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB43Q86YS6 AL138709.1-201ENST00000614840 1693 ntBASIC14.36□□□□□ -0.11
RAB43Q86YS6 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB43Q86YS6 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RAB43Q86YS6 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RAB43Q86YS6 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB43Q86YS6 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB43Q86YS6 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
RAB43Q86YS6 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RAB43Q86YS6 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
RAB43Q86YS6 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB43Q86YS6 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RAB43Q86YS6 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB43Q86YS6 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms