Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC18.33■□□□□ 0.52
COL23A1Q86Y22 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC18.33■□□□□ 0.52
COL23A1Q86Y22 AC092580.1-201ENST00000433998 658 ntBASIC18.33■□□□□ 0.52
COL23A1Q86Y22 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL23A1Q86Y22 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC18.33■□□□□ 0.52
COL23A1Q86Y22 PTGER4P3-201ENST00000458150 252 ntBASIC18.33■□□□□ 0.52
COL23A1Q86Y22 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC18.33■□□□□ 0.52
COL23A1Q86Y22 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC18.33■□□□□ 0.52
COL23A1Q86Y22 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
COL23A1Q86Y22 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL23A1Q86Y22 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC18.33■□□□□ 0.52
COL23A1Q86Y22 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC18.33■□□□□ 0.52
COL23A1Q86Y22 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC18.33■□□□□ 0.52
COL23A1Q86Y22 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL23A1Q86Y22 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.33■□□□□ 0.52
COL23A1Q86Y22 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC18.33■□□□□ 0.52
COL23A1Q86Y22 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.33■□□□□ 0.52
COL23A1Q86Y22 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.33■□□□□ 0.52
COL23A1Q86Y22 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
COL23A1Q86Y22 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL23A1Q86Y22 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL23A1Q86Y22 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL23A1Q86Y22 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL23A1Q86Y22 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL23A1Q86Y22 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.33■□□□□ 0.52
COL23A1Q86Y22 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC18.33■□□□□ 0.52
COL23A1Q86Y22 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 ELP5-212ENST00000574255 671 ntTSL 2 BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 AC021016.3-201ENST00000608367 477 ntBASIC18.32■□□□□ 0.52
COL23A1Q86Y22 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 BRD7P5-201ENST00000299197 1822 ntBASIC18.32■□□□□ 0.52
COL23A1Q86Y22 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 AC092850.2-201ENST00000623821 2697 ntBASIC18.32■□□□□ 0.52
COL23A1Q86Y22 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL23A1Q86Y22 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 AC023141.7-201ENST00000430646 407 ntBASIC18.31■□□□□ 0.52
COL23A1Q86Y22 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 SCARNA12-201ENST00000459155 270 ntBASIC18.31■□□□□ 0.52
COL23A1Q86Y22 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 TRMT112P3-201ENST00000580149 358 ntBASIC18.31■□□□□ 0.52
COL23A1Q86Y22 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 SSR4P1-203ENST00000599569 2260 ntBASIC18.31■□□□□ 0.52
COL23A1Q86Y22 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms