Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 AC023141.7-201ENST00000430646 407 ntBASIC10.11□□□□□ -0.79
CSMD3Q7Z407 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 AC008536.3-201ENST00000623282 1599 ntBASIC10.11□□□□□ -0.79
CSMD3Q7Z407 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 MT2A-202ENST00000561491 581 ntTSL 2 BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 MIR5001-201ENST00000580185 100 ntBASIC10.1□□□□□ -0.79
CSMD3Q7Z407 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 AC023024.2-201ENST00000623561 1993 ntBASIC10.1□□□□□ -0.79
CSMD3Q7Z407 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 TPO-203ENST00000346956 2923 ntTSL 5 BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC10.1□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms