Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 ACA64.2-201ENST00000459014 129 ntBASIC13.82□□□□□ -0.2
ZNF550Q7Z398 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 RAB43P1-201ENST00000561790 589 ntBASIC13.82□□□□□ -0.2
ZNF550Q7Z398 AP001063.1-201ENST00000568332 529 ntBASIC13.82□□□□□ -0.2
ZNF550Q7Z398 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 AL162274.1-201ENST00000617191 1098 ntBASIC13.82□□□□□ -0.2
ZNF550Q7Z398 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 AC005912.2-201ENST00000619492 2400 ntBASIC13.82□□□□□ -0.2
ZNF550Q7Z398 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 AC055811.4-201ENST00000624039 1754 ntBASIC13.81□□□□□ -0.2
ZNF550Q7Z398 AC007191.1-201ENST00000623179 2995 ntBASIC13.81□□□□□ -0.2
ZNF550Q7Z398 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.81□□□□□ -0.2
ZNF550Q7Z398 AC079776.1-201ENST00000401540 1152 ntBASIC13.81□□□□□ -0.2
ZNF550Q7Z398 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF550Q7Z398 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 ACTBP8-201ENST00000403258 1108 ntBASIC13.8□□□□□ -0.2
ZNF550Q7Z398 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms