Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC027612.4-201ENST00000605371 583 ntBASIC13.59□□□□□ -0.23
SHFQ7M4L6 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SHFQ7M4L6 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.59□□□□□ -0.23
SHFQ7M4L6 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
SHFQ7M4L6 AC134684.3-201ENST00000641758 218 ntBASIC13.59□□□□□ -0.23
SHFQ7M4L6 AL109936.8-201ENST00000641772 604 ntBASIC13.59□□□□□ -0.23
SHFQ7M4L6 CICP20-201ENST00000443330 2801 ntBASIC13.59□□□□□ -0.23
SHFQ7M4L6 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHFQ7M4L6 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHFQ7M4L6 AC012617.1-204ENST00000586340 2305 ntBASIC13.59□□□□□ -0.23
SHFQ7M4L6 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHFQ7M4L6 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHFQ7M4L6 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHFQ7M4L6 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.59□□□□□ -0.23
SHFQ7M4L6 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHFQ7M4L6 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHFQ7M4L6 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SHFQ7M4L6 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
SHFQ7M4L6 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
SHFQ7M4L6 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SHFQ7M4L6 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.59□□□□□ -0.23
SHFQ7M4L6 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.59□□□□□ -0.23
SHFQ7M4L6 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHFQ7M4L6 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.59□□□□□ -0.23
SHFQ7M4L6 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
SHFQ7M4L6 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
SHFQ7M4L6 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.58□□□□□ -0.23
SHFQ7M4L6 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
SHFQ7M4L6 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
SHFQ7M4L6 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.58□□□□□ -0.23
SHFQ7M4L6 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
SHFQ7M4L6 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
SHFQ7M4L6 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHFQ7M4L6 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
SHFQ7M4L6 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHFQ7M4L6 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SHFQ7M4L6 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
SHFQ7M4L6 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SHFQ7M4L6 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.58□□□□□ -0.24
SHFQ7M4L6 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHFQ7M4L6 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.58□□□□□ -0.24
SHFQ7M4L6 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SHFQ7M4L6 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.58□□□□□ -0.24
SHFQ7M4L6 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHFQ7M4L6 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHFQ7M4L6 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SHFQ7M4L6 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHFQ7M4L6 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.58□□□□□ -0.24
SHFQ7M4L6 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
SHFQ7M4L6 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
SHFQ7M4L6 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.58□□□□□ -0.24
SHFQ7M4L6 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.58□□□□□ -0.24
SHFQ7M4L6 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.58□□□□□ -0.24
SHFQ7M4L6 AC125807.1-201ENST00000483097 614 ntBASIC13.58□□□□□ -0.24
SHFQ7M4L6 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.58□□□□□ -0.24
SHFQ7M4L6 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
SHFQ7M4L6 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
SHFQ7M4L6 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.58□□□□□ -0.24
SHFQ7M4L6 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.58□□□□□ -0.24
SHFQ7M4L6 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
SHFQ7M4L6 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.58□□□□□ -0.24
SHFQ7M4L6 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.58□□□□□ -0.24
SHFQ7M4L6 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.58□□□□□ -0.24
SHFQ7M4L6 AC079781.4-201ENST00000641908 219 ntBASIC13.58□□□□□ -0.24
SHFQ7M4L6 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.58□□□□□ -0.24
SHFQ7M4L6 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
SHFQ7M4L6 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.58□□□□□ -0.24
SHFQ7M4L6 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.58□□□□□ -0.24
SHFQ7M4L6 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
SHFQ7M4L6 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
SHFQ7M4L6 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SHFQ7M4L6 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHFQ7M4L6 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SHFQ7M4L6 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHFQ7M4L6 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
SHFQ7M4L6 AC087499.5-201ENST00000452760 1342 ntBASIC13.58□□□□□ -0.24
SHFQ7M4L6 AL360270.3-201ENST00000609118 1348 ntBASIC13.58□□□□□ -0.24
SHFQ7M4L6 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
SHFQ7M4L6 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHFQ7M4L6 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHFQ7M4L6 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHFQ7M4L6 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
SHFQ7M4L6 AC018665.1-201ENST00000622927 1362 ntBASIC13.58□□□□□ -0.24
SHFQ7M4L6 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
SHFQ7M4L6 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.57□□□□□ -0.24
SHFQ7M4L6 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SHFQ7M4L6 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHFQ7M4L6 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SHFQ7M4L6 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.57□□□□□ -0.24
SHFQ7M4L6 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SHFQ7M4L6 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.57□□□□□ -0.24
SHFQ7M4L6 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHFQ7M4L6 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHFQ7M4L6 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.57□□□□□ -0.24
SHFQ7M4L6 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHFQ7M4L6 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.57□□□□□ -0.24
SHFQ7M4L6 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SHFQ7M4L6 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
SHFQ7M4L6 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHFQ7M4L6 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms