Protein–RNA interactions for Protein: Q71RC9

SMIM5, Small integral membrane protein 5, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM5Q71RC9 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMIM5Q71RC9 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SMIM5Q71RC9 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.51■□□□□ 0.55
SMIM5Q71RC9 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
SMIM5Q71RC9 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMIM5Q71RC9 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMIM5Q71RC9 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMIM5Q71RC9 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.51■□□□□ 0.55
SMIM5Q71RC9 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMIM5Q71RC9 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMIM5Q71RC9 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMIM5Q71RC9 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SMIM5Q71RC9 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SMIM5Q71RC9 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMIM5Q71RC9 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMIM5Q71RC9 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMIM5Q71RC9 OR8T1P-201ENST00000421347 918 ntBASIC18.51■□□□□ 0.55
SMIM5Q71RC9 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC18.51■□□□□ 0.55
SMIM5Q71RC9 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC18.51■□□□□ 0.55
SMIM5Q71RC9 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC18.51■□□□□ 0.55
SMIM5Q71RC9 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC18.51■□□□□ 0.55
SMIM5Q71RC9 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC18.51■□□□□ 0.55
SMIM5Q71RC9 MVK-217ENST00000639206 367 ntTSL 5 BASIC18.51■□□□□ 0.55
SMIM5Q71RC9 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMIM5Q71RC9 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMIM5Q71RC9 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.51■□□□□ 0.55
SMIM5Q71RC9 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.51■□□□□ 0.55
SMIM5Q71RC9 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.51■□□□□ 0.55
SMIM5Q71RC9 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMIM5Q71RC9 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMIM5Q71RC9 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMIM5Q71RC9 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC18.51■□□□□ 0.55
SMIM5Q71RC9 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.51■□□□□ 0.55
SMIM5Q71RC9 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMIM5Q71RC9 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.51■□□□□ 0.55
SMIM5Q71RC9 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMIM5Q71RC9 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.5■□□□□ 0.55
SMIM5Q71RC9 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SMIM5Q71RC9 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMIM5Q71RC9 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SMIM5Q71RC9 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SMIM5Q71RC9 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMIM5Q71RC9 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMIM5Q71RC9 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SMIM5Q71RC9 AC136621.1-201ENST00000624017 2304 ntBASIC18.5■□□□□ 0.55
SMIM5Q71RC9 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC18.5■□□□□ 0.55
SMIM5Q71RC9 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SMIM5Q71RC9 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMIM5Q71RC9 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMIM5Q71RC9 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMIM5Q71RC9 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SMIM5Q71RC9 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SMIM5Q71RC9 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC18.5■□□□□ 0.55
SMIM5Q71RC9 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC18.5■□□□□ 0.55
SMIM5Q71RC9 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC18.5■□□□□ 0.55
SMIM5Q71RC9 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC18.5■□□□□ 0.55
SMIM5Q71RC9 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SMIM5Q71RC9 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.5■□□□□ 0.55
SMIM5Q71RC9 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMIM5Q71RC9 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SMIM5Q71RC9 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMIM5Q71RC9 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMIM5Q71RC9 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMIM5Q71RC9 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.5■□□□□ 0.55
SMIM5Q71RC9 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.5■□□□□ 0.55
SMIM5Q71RC9 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SMIM5Q71RC9 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMIM5Q71RC9 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.5■□□□□ 0.55
SMIM5Q71RC9 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SMIM5Q71RC9 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMIM5Q71RC9 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMIM5Q71RC9 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMIM5Q71RC9 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.49■□□□□ 0.55
SMIM5Q71RC9 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMIM5Q71RC9 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SMIM5Q71RC9 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC18.49■□□□□ 0.55
SMIM5Q71RC9 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMIM5Q71RC9 PSMD4P1-201ENST00000433951 1109 ntBASIC18.49■□□□□ 0.55
SMIM5Q71RC9 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC18.49■□□□□ 0.55
SMIM5Q71RC9 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC18.49■□□□□ 0.55
SMIM5Q71RC9 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC18.49■□□□□ 0.55
SMIM5Q71RC9 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC18.49■□□□□ 0.55
SMIM5Q71RC9 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMIM5Q71RC9 AC027139.1-201ENST00000565286 951 ntBASIC18.49■□□□□ 0.55
SMIM5Q71RC9 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC18.49■□□□□ 0.55
SMIM5Q71RC9 RN7SL357P-201ENST00000581065 298 ntBASIC18.49■□□□□ 0.55
SMIM5Q71RC9 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SMIM5Q71RC9 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC18.49■□□□□ 0.55
SMIM5Q71RC9 AC002044.2-201ENST00000624910 970 ntBASIC18.49■□□□□ 0.55
SMIM5Q71RC9 CASP16P-204ENST00000635032 809 ntBASIC18.49■□□□□ 0.55
SMIM5Q71RC9 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMIM5Q71RC9 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMIM5Q71RC9 FTX-216ENST00000638985 1367 ntTSL 5 BASIC18.49■□□□□ 0.55
SMIM5Q71RC9 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMIM5Q71RC9 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMIM5Q71RC9 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMIM5Q71RC9 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMIM5Q71RC9 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC18.49■□□□□ 0.55
SMIM5Q71RC9 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SMIM5Q71RC9 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms