Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP31Q70CQ4 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP31Q70CQ4 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP31Q70CQ4 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC19.54■□□□□ 0.72
USP31Q70CQ4 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP31Q70CQ4 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
USP31Q70CQ4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
USP31Q70CQ4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP31Q70CQ4 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP31Q70CQ4 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP31Q70CQ4 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC19.53■□□□□ 0.72
USP31Q70CQ4 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
USP31Q70CQ4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP31Q70CQ4 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP31Q70CQ4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC19.53■□□□□ 0.72
USP31Q70CQ4 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC19.53■□□□□ 0.72
USP31Q70CQ4 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP31Q70CQ4 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP31Q70CQ4 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC19.53■□□□□ 0.72
USP31Q70CQ4 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC19.53■□□□□ 0.72
USP31Q70CQ4 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC19.53■□□□□ 0.72
USP31Q70CQ4 AL161932.2-201ENST00000435436 679 ntBASIC19.53■□□□□ 0.72
USP31Q70CQ4 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC19.53■□□□□ 0.72
USP31Q70CQ4 SORD2P-201ENST00000558556 1069 ntBASIC19.53■□□□□ 0.72
USP31Q70CQ4 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC19.53■□□□□ 0.72
USP31Q70CQ4 NUDT4P2-201ENST00000578341 546 ntBASIC19.53■□□□□ 0.72
USP31Q70CQ4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
USP31Q70CQ4 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
USP31Q70CQ4 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP31Q70CQ4 AL354702.1-201ENST00000442006 1960 ntBASIC19.53■□□□□ 0.72
USP31Q70CQ4 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP31Q70CQ4 AC090502.4-201ENST00000551714 1386 ntBASIC19.53■□□□□ 0.72
USP31Q70CQ4 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC19.53■□□□□ 0.72
USP31Q70CQ4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
USP31Q70CQ4 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP31Q70CQ4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP31Q70CQ4 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
USP31Q70CQ4 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
USP31Q70CQ4 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP31Q70CQ4 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP31Q70CQ4 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP31Q70CQ4 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC19.52■□□□□ 0.72
USP31Q70CQ4 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP31Q70CQ4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP31Q70CQ4 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP31Q70CQ4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP31Q70CQ4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP31Q70CQ4 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
USP31Q70CQ4 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP31Q70CQ4 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP31Q70CQ4 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP31Q70CQ4 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
USP31Q70CQ4 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP31Q70CQ4 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP31Q70CQ4 AL357563.1-201ENST00000404728 395 ntBASIC19.52■□□□□ 0.72
USP31Q70CQ4 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC19.52■□□□□ 0.72
USP31Q70CQ4 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP31Q70CQ4 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC19.52■□□□□ 0.72
USP31Q70CQ4 RPL18AP8-201ENST00000486071 528 ntBASIC19.52■□□□□ 0.72
USP31Q70CQ4 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC19.52■□□□□ 0.72
USP31Q70CQ4 RN7SL665P-201ENST00000578793 300 ntBASIC19.52■□□□□ 0.72
USP31Q70CQ4 MIR2392-201ENST00000584881 84 ntBASIC19.52■□□□□ 0.72
USP31Q70CQ4 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC19.52■□□□□ 0.72
USP31Q70CQ4 AC104506.1-201ENST00000609247 429 ntBASIC19.52■□□□□ 0.72
USP31Q70CQ4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP31Q70CQ4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP31Q70CQ4 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP31Q70CQ4 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
USP31Q70CQ4 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC19.52■□□□□ 0.71
USP31Q70CQ4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
USP31Q70CQ4 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC19.51■□□□□ 0.71
USP31Q70CQ4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP31Q70CQ4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
USP31Q70CQ4 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC19.51■□□□□ 0.71
USP31Q70CQ4 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP31Q70CQ4 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP31Q70CQ4 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
USP31Q70CQ4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP31Q70CQ4 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP31Q70CQ4 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC19.51■□□□□ 0.71
USP31Q70CQ4 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC19.51■□□□□ 0.71
USP31Q70CQ4 GSN-215ENST00000545652 2428 ntTSL 2 BASIC19.51■□□□□ 0.71
USP31Q70CQ4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
USP31Q70CQ4 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC19.51■□□□□ 0.71
USP31Q70CQ4 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP31Q70CQ4 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
USP31Q70CQ4 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
USP31Q70CQ4 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP31Q70CQ4 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
USP31Q70CQ4 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP31Q70CQ4 BUD31-205ENST00000456893 512 ntTSL 5 BASIC19.51■□□□□ 0.71
USP31Q70CQ4 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
USP31Q70CQ4 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC19.51■□□□□ 0.71
USP31Q70CQ4 AC007952.4-201ENST00000573866 637 ntBASIC19.51■□□□□ 0.71
USP31Q70CQ4 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC19.51■□□□□ 0.71
USP31Q70CQ4 AC021016.3-201ENST00000608367 477 ntBASIC19.51■□□□□ 0.71
USP31Q70CQ4 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC19.51■□□□□ 0.71
USP31Q70CQ4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
USP31Q70CQ4 IL9RP3-201ENST00000442856 1674 ntBASIC19.51■□□□□ 0.71
USP31Q70CQ4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms