Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 AC012508.2-201ENST00000567613 1472 ntBASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 AC093909.1-201ENST00000504731 1122 ntBASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 OR7E14P-202ENST00000530490 1290 ntBASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 CLEC4GP1-201ENST00000596555 870 ntBASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 AC004706.3-202ENST00000621574 984 ntBASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 AC005593.1-201ENST00000624894 515 ntBASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 AL805961.1-202ENST00000641562 540 ntBASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
KCNIP4Q6PIL6 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
KCNIP4Q6PIL6 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC11.65□□□□□ -0.55
KCNIP4Q6PIL6 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC11.65□□□□□ -0.55
KCNIP4Q6PIL6 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
KCNIP4Q6PIL6 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC11.65□□□□□ -0.55
KCNIP4Q6PIL6 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.55
KCNIP4Q6PIL6 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
KCNIP4Q6PIL6 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
KCNIP4Q6PIL6 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
KCNIP4Q6PIL6 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
KCNIP4Q6PIL6 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC11.64□□□□□ -0.55
KCNIP4Q6PIL6 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
KCNIP4Q6PIL6 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
KCNIP4Q6PIL6 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
KCNIP4Q6PIL6 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
KCNIP4Q6PIL6 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
KCNIP4Q6PIL6 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC11.64□□□□□ -0.55
KCNIP4Q6PIL6 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
KCNIP4Q6PIL6 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
KCNIP4Q6PIL6 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
KCNIP4Q6PIL6 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
KCNIP4Q6PIL6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC11.64□□□□□ -0.55
KCNIP4Q6PIL6 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
KCNIP4Q6PIL6 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
KCNIP4Q6PIL6 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC11.64□□□□□ -0.55
KCNIP4Q6PIL6 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
KCNIP4Q6PIL6 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC11.64□□□□□ -0.55
KCNIP4Q6PIL6 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC11.64□□□□□ -0.55
KCNIP4Q6PIL6 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC11.64□□□□□ -0.55
KCNIP4Q6PIL6 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
KCNIP4Q6PIL6 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
KCNIP4Q6PIL6 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
KCNIP4Q6PIL6 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC11.64□□□□□ -0.55
KCNIP4Q6PIL6 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
KCNIP4Q6PIL6 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
KCNIP4Q6PIL6 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
KCNIP4Q6PIL6 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
KCNIP4Q6PIL6 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC11.64□□□□□ -0.55
KCNIP4Q6PIL6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
KCNIP4Q6PIL6 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms