Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTR9Q6PD62 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CTR9Q6PD62 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTR9Q6PD62 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.72■□□□□ 0.43
CTR9Q6PD62 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.72■□□□□ 0.43
CTR9Q6PD62 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTR9Q6PD62 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTR9Q6PD62 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTR9Q6PD62 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTR9Q6PD62 AP002414.2-201ENST00000591780 3365 ntBASIC17.72■□□□□ 0.43
CTR9Q6PD62 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTR9Q6PD62 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTR9Q6PD62 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTR9Q6PD62 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
CTR9Q6PD62 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.72■□□□□ 0.43
CTR9Q6PD62 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.72■□□□□ 0.43
CTR9Q6PD62 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTR9Q6PD62 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTR9Q6PD62 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CTR9Q6PD62 AC020907.1-201ENST00000616460 1350 ntBASIC17.72■□□□□ 0.43
CTR9Q6PD62 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTR9Q6PD62 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTR9Q6PD62 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTR9Q6PD62 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTR9Q6PD62 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CTR9Q6PD62 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.72■□□□□ 0.43
CTR9Q6PD62 AL354877.1-201ENST00000424412 413 ntBASIC17.72■□□□□ 0.43
CTR9Q6PD62 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.72■□□□□ 0.43
CTR9Q6PD62 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTR9Q6PD62 AC006033.1-201ENST00000440505 426 ntBASIC17.72■□□□□ 0.43
CTR9Q6PD62 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.72■□□□□ 0.43
CTR9Q6PD62 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.72■□□□□ 0.43
CTR9Q6PD62 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.72■□□□□ 0.43
CTR9Q6PD62 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CTR9Q6PD62 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.72■□□□□ 0.43
CTR9Q6PD62 AC005730.2-201ENST00000564549 1184 ntBASIC17.72■□□□□ 0.43
CTR9Q6PD62 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.72■□□□□ 0.43
CTR9Q6PD62 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.72■□□□□ 0.43
CTR9Q6PD62 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.72■□□□□ 0.43
CTR9Q6PD62 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTR9Q6PD62 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.72■□□□□ 0.43
CTR9Q6PD62 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTR9Q6PD62 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.72■□□□□ 0.43
CTR9Q6PD62 TK2-221ENST00000620035 5060 ntTSL 2 BASIC17.72■□□□□ 0.43
CTR9Q6PD62 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTR9Q6PD62 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTR9Q6PD62 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTR9Q6PD62 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.72■□□□□ 0.43
CTR9Q6PD62 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTR9Q6PD62 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CTR9Q6PD62 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTR9Q6PD62 AL365209.1-201ENST00000624418 6473 ntBASIC17.72■□□□□ 0.43
CTR9Q6PD62 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
CTR9Q6PD62 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTR9Q6PD62 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CTR9Q6PD62 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.71■□□□□ 0.43
CTR9Q6PD62 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTR9Q6PD62 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.71■□□□□ 0.43
CTR9Q6PD62 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTR9Q6PD62 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.71■□□□□ 0.43
CTR9Q6PD62 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTR9Q6PD62 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTR9Q6PD62 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTR9Q6PD62 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CTR9Q6PD62 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.71■□□□□ 0.43
CTR9Q6PD62 CICP4-201ENST00000447359 2812 ntBASIC17.71■□□□□ 0.43
CTR9Q6PD62 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTR9Q6PD62 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CTR9Q6PD62 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTR9Q6PD62 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.71■□□□□ 0.43
CTR9Q6PD62 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.71■□□□□ 0.43
CTR9Q6PD62 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.71■□□□□ 0.43
CTR9Q6PD62 AC022494.1-201ENST00000466044 728 ntBASIC17.71■□□□□ 0.43
CTR9Q6PD62 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.71■□□□□ 0.43
CTR9Q6PD62 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
CTR9Q6PD62 AC131206.1-201ENST00000538078 1211 ntBASIC17.71■□□□□ 0.43
CTR9Q6PD62 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.71■□□□□ 0.43
CTR9Q6PD62 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.71■□□□□ 0.43
CTR9Q6PD62 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.71■□□□□ 0.43
CTR9Q6PD62 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTR9Q6PD62 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.71■□□□□ 0.43
CTR9Q6PD62 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTR9Q6PD62 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.71■□□□□ 0.43
CTR9Q6PD62 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTR9Q6PD62 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.71■□□□□ 0.43
CTR9Q6PD62 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTR9Q6PD62 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.71■□□□□ 0.43
CTR9Q6PD62 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.71■□□□□ 0.43
CTR9Q6PD62 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CTR9Q6PD62 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.71■□□□□ 0.43
CTR9Q6PD62 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CTR9Q6PD62 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.71■□□□□ 0.42
CTR9Q6PD62 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CTR9Q6PD62 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CTR9Q6PD62 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CTR9Q6PD62 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTR9Q6PD62 AC007292.2-201ENST00000593524 1812 ntBASIC17.7■□□□□ 0.42
CTR9Q6PD62 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CTR9Q6PD62 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.7■□□□□ 0.42
CTR9Q6PD62 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms