Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.86■□□□□ 0.45
RNF20Q5VTR2 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 AC022447.6-201ENST00000515522 438 ntBASIC17.86■□□□□ 0.45
RNF20Q5VTR2 RN7SL48P-201ENST00000579283 293 ntBASIC17.86■□□□□ 0.45
RNF20Q5VTR2 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 AC004466.1-201ENST00000599515 1080 ntBASIC17.86■□□□□ 0.45
RNF20Q5VTR2 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 AP001267.2-201ENST00000532619 2086 ntBASIC17.86■□□□□ 0.45
RNF20Q5VTR2 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF20Q5VTR2 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 AL355864.2-201ENST00000447420 863 ntBASIC17.85■□□□□ 0.45
RNF20Q5VTR2 AC007389.4-201ENST00000454674 793 ntBASIC17.85■□□□□ 0.45
RNF20Q5VTR2 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 AC015802.1-201ENST00000588104 1449 ntBASIC17.85■□□□□ 0.45
RNF20Q5VTR2 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 AC097359.2-201ENST00000604992 2389 ntBASIC17.85■□□□□ 0.45
RNF20Q5VTR2 ENPP7P14-201ENST00000621765 1040 ntBASIC17.85■□□□□ 0.45
RNF20Q5VTR2 RPSAP52-203ENST00000622976 1023 ntBASIC17.85■□□□□ 0.45
RNF20Q5VTR2 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 USP28-214ENST00000545540 3431 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF20Q5VTR2 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 FES-203ENST00000394302 2133 ntTSL 5 BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 AGGF1P1-201ENST00000509500 2073 ntBASIC17.84■□□□□ 0.45
RNF20Q5VTR2 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms