Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 FDX1P1-201ENST00000449115 551 ntBASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 PGAM5P1-201ENST00000518923 814 ntBASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 AL512361.1-201ENST00000554200 418 ntBASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 AC005829.1-201ENST00000570002 483 ntBASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 AL121894.2-201ENST00000602977 491 ntBASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 GPER1-207ENST00000619052 571 ntTSL 2 BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 AC009093.7-201ENST00000623853 1223 ntBASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 AC004461.2-201ENST00000629517 803 ntBASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 PKIG-203ENST00000372887 769 ntTSL 3 BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 SUN1-204ENST00000403868 978 ntTSL 2 BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 RN7SL618P-201ENST00000477850 296 ntBASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 SDHAP3-202ENST00000515467 728 ntBASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 AL109936.8-201ENST00000641772 604 ntBASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 AC093525.8-201ENST00000624099 1342 ntBASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 343.1 ms