Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDCA8Q53HL2 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDCA8Q53HL2 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDCA8Q53HL2 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDCA8Q53HL2 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDCA8Q53HL2 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC20.47■□□□□ 0.87
CDCA8Q53HL2 AC144831.1-201ENST00000573312 2656 ntBASIC20.47■□□□□ 0.87
CDCA8Q53HL2 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDCA8Q53HL2 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDCA8Q53HL2 AC004899.1-201ENST00000424687 1714 ntBASIC20.47■□□□□ 0.87
CDCA8Q53HL2 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDCA8Q53HL2 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC20.46■□□□□ 0.87
CDCA8Q53HL2 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDCA8Q53HL2 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CDCA8Q53HL2 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDCA8Q53HL2 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC20.46■□□□□ 0.87
CDCA8Q53HL2 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC20.46■□□□□ 0.87
CDCA8Q53HL2 AC138028.6-201ENST00000616106 1482 ntBASIC20.46■□□□□ 0.87
CDCA8Q53HL2 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDCA8Q53HL2 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDCA8Q53HL2 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDCA8Q53HL2 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
CDCA8Q53HL2 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC20.46■□□□□ 0.87
CDCA8Q53HL2 AC005740.2-201ENST00000511085 419 ntBASIC20.46■□□□□ 0.87
CDCA8Q53HL2 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC20.46■□□□□ 0.87
CDCA8Q53HL2 MIR3615-201ENST00000581999 87 ntBASIC20.46■□□□□ 0.87
CDCA8Q53HL2 AC020914.3-201ENST00000594712 304 ntBASIC20.46■□□□□ 0.87
CDCA8Q53HL2 AL136295.7-201ENST00000619226 1200 ntBASIC20.46■□□□□ 0.87
CDCA8Q53HL2 GPR182-203ENST00000622922 591 ntBASIC20.46■□□□□ 0.87
CDCA8Q53HL2 RPL35-206ENST00000629845 340 ntTSL 5 BASIC20.46■□□□□ 0.87
CDCA8Q53HL2 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
CDCA8Q53HL2 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDCA8Q53HL2 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
CDCA8Q53HL2 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDCA8Q53HL2 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDCA8Q53HL2 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDCA8Q53HL2 KRT8P28-201ENST00000433288 1390 ntBASIC20.46■□□□□ 0.87
CDCA8Q53HL2 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CDCA8Q53HL2 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CDCA8Q53HL2 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDCA8Q53HL2 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDCA8Q53HL2 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
CDCA8Q53HL2 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC20.45■□□□□ 0.86
CDCA8Q53HL2 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDCA8Q53HL2 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDCA8Q53HL2 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC20.45■□□□□ 0.86
CDCA8Q53HL2 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDCA8Q53HL2 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC20.45■□□□□ 0.86
CDCA8Q53HL2 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CDCA8Q53HL2 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CDCA8Q53HL2 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDCA8Q53HL2 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDCA8Q53HL2 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC20.45■□□□□ 0.86
CDCA8Q53HL2 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CDCA8Q53HL2 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDCA8Q53HL2 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
CDCA8Q53HL2 AL645933.1-201ENST00000440087 609 ntBASIC20.45■□□□□ 0.86
CDCA8Q53HL2 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC20.45■□□□□ 0.86
CDCA8Q53HL2 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC20.45■□□□□ 0.86
CDCA8Q53HL2 SCARNA20.5-201ENST00000516991 142 ntBASIC20.45■□□□□ 0.86
CDCA8Q53HL2 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC20.45■□□□□ 0.86
CDCA8Q53HL2 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDCA8Q53HL2 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC20.45■□□□□ 0.86
CDCA8Q53HL2 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC20.45■□□□□ 0.86
CDCA8Q53HL2 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDCA8Q53HL2 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC20.45■□□□□ 0.86
CDCA8Q53HL2 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CDCA8Q53HL2 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC20.45■□□□□ 0.86
CDCA8Q53HL2 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDCA8Q53HL2 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
CDCA8Q53HL2 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDCA8Q53HL2 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDCA8Q53HL2 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC20.44■□□□□ 0.86
CDCA8Q53HL2 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC20.44■□□□□ 0.86
CDCA8Q53HL2 KHSRPP1-201ENST00000427983 1768 ntBASIC20.44■□□□□ 0.86
CDCA8Q53HL2 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDCA8Q53HL2 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDCA8Q53HL2 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDCA8Q53HL2 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC20.44■□□□□ 0.86
CDCA8Q53HL2 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDCA8Q53HL2 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDCA8Q53HL2 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDCA8Q53HL2 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDCA8Q53HL2 HNRNPA1P27-201ENST00000412087 955 ntBASIC20.44■□□□□ 0.86
CDCA8Q53HL2 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC20.44■□□□□ 0.86
CDCA8Q53HL2 KLF2P1-201ENST00000447438 1042 ntBASIC20.44■□□□□ 0.86
CDCA8Q53HL2 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CDCA8Q53HL2 NOP2-211ENST00000540228 668 ntTSL 2 BASIC20.44■□□□□ 0.86
CDCA8Q53HL2 PCBP2-OT1-201ENST00000634357 590 ntBASIC20.44■□□□□ 0.86
CDCA8Q53HL2 AC068587.8-201ENST00000641239 219 ntBASIC20.44■□□□□ 0.86
CDCA8Q53HL2 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CDCA8Q53HL2 MX1-218ENST00000619682 1980 ntTSL 5 BASIC20.44■□□□□ 0.86
CDCA8Q53HL2 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDCA8Q53HL2 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC20.44■□□□□ 0.86
CDCA8Q53HL2 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CDCA8Q53HL2 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDCA8Q53HL2 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CDCA8Q53HL2 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDCA8Q53HL2 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC20.44■□□□□ 0.86
CDCA8Q53HL2 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms