Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 SNX18-202ENST00000343017 3140 ntBASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 AC015802.1-201ENST00000588104 1449 ntBASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 ANKRD19P-201ENST00000338192 862 ntBASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 RPL7P3-201ENST00000441388 714 ntBASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN20Q4JDL3 AL354989.2-201ENST00000435838 1540 ntBASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 AC005089.1-201ENST00000619486 2241 ntBASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 AC004945.1-201ENST00000416738 983 ntBASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 SNX29P1-201ENST00000548357 1007 ntBASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 AC073413.1-201ENST00000603927 732 ntBASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 RHOXF1P1-202ENST00000635473 501 ntBASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.68■□□□□ 0.1
PTPN20Q4JDL3 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms