Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 AC079140.1-201ENST00000508039 487 ntBASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 KRT8P48-201ENST00000515599 1220 ntBASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 SAMD11P1-201ENST00000571429 661 ntBASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 AC004835.2-201ENST00000603762 682 ntBASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 AC026120.1-201ENST00000611536 926 ntBASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 AC134684.3-201ENST00000641758 218 ntBASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 AC092902.6-201ENST00000641783 218 ntBASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 AC015909.5-201ENST00000624336 2266 ntBASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ANKRD55Q3KP44 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 UXT-AS1-201ENST00000590504 1525 ntBASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 AL353705.2-201ENST00000428243 662 ntBASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 ALG1L5P-201ENST00000482043 771 ntBASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 AC019294.4-201ENST00000561777 2905 ntBASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 TCAM1P-207ENST00000485295 1537 ntBASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.47□□□□□ -0.41
ANKRD55Q3KP44 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 AC073548.1-201ENST00000624088 1882 ntBASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 AL591122.2-201ENST00000624125 1853 ntBASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 410.9 ms