Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB3Q15768 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
EFNB3Q15768 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.74□□□□□ -0.37
EFNB3Q15768 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB3Q15768 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB3Q15768 AC023090.2-201ENST00000625182 2110 ntBASIC12.74□□□□□ -0.37
EFNB3Q15768 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.74□□□□□ -0.37
EFNB3Q15768 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
EFNB3Q15768 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.74□□□□□ -0.37
EFNB3Q15768 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.74□□□□□ -0.37
EFNB3Q15768 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.74□□□□□ -0.37
EFNB3Q15768 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.74□□□□□ -0.37
EFNB3Q15768 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB3Q15768 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB3Q15768 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.73□□□□□ -0.37
EFNB3Q15768 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.73□□□□□ -0.37
EFNB3Q15768 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB3Q15768 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB3Q15768 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB3Q15768 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.73□□□□□ -0.37
EFNB3Q15768 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB3Q15768 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.73□□□□□ -0.37
EFNB3Q15768 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
EFNB3Q15768 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB3Q15768 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
EFNB3Q15768 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.73□□□□□ -0.37
EFNB3Q15768 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
EFNB3Q15768 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB3Q15768 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB3Q15768 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB3Q15768 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB3Q15768 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB3Q15768 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB3Q15768 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
EFNB3Q15768 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB3Q15768 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.73□□□□□ -0.37
EFNB3Q15768 NME6-203ENST00000415644 849 ntTSL 2 BASIC12.73□□□□□ -0.37
EFNB3Q15768 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC12.73□□□□□ -0.37
EFNB3Q15768 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
EFNB3Q15768 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.73□□□□□ -0.37
EFNB3Q15768 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC12.73□□□□□ -0.37
EFNB3Q15768 NAT9-222ENST00000583476 583 ntTSL 3 BASIC12.73□□□□□ -0.37
EFNB3Q15768 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB3Q15768 KC6-205ENST00000599934 556 ntTSL 4 BASIC12.73□□□□□ -0.37
EFNB3Q15768 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB3Q15768 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB3Q15768 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB3Q15768 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB3Q15768 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
EFNB3Q15768 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.73□□□□□ -0.37
EFNB3Q15768 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB3Q15768 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB3Q15768 SHC1P1-201ENST00000425230 1745 ntBASIC12.73□□□□□ -0.37
EFNB3Q15768 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.73□□□□□ -0.37
EFNB3Q15768 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB3Q15768 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB3Q15768 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB3Q15768 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB3Q15768 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
EFNB3Q15768 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
EFNB3Q15768 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB3Q15768 AC018735.1-201ENST00000437208 1502 ntBASIC12.72□□□□□ -0.37
EFNB3Q15768 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB3Q15768 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB3Q15768 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB3Q15768 AL161772.1-201ENST00000610494 4412 ntBASIC12.72□□□□□ -0.37
EFNB3Q15768 AC138028.6-201ENST00000616106 1482 ntBASIC12.72□□□□□ -0.37
EFNB3Q15768 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.72□□□□□ -0.37
EFNB3Q15768 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
EFNB3Q15768 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB3Q15768 INE2-201ENST00000630399 1874 ntBASIC12.72□□□□□ -0.37
EFNB3Q15768 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB3Q15768 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
EFNB3Q15768 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB3Q15768 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.72□□□□□ -0.37
EFNB3Q15768 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB3Q15768 KRT8P29-201ENST00000420409 1371 ntBASIC12.72□□□□□ -0.37
EFNB3Q15768 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB3Q15768 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.72□□□□□ -0.37
EFNB3Q15768 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.72□□□□□ -0.37
EFNB3Q15768 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.72□□□□□ -0.37
EFNB3Q15768 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB3Q15768 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.72□□□□□ -0.37
EFNB3Q15768 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB3Q15768 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC12.72□□□□□ -0.37
EFNB3Q15768 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB3Q15768 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.72□□□□□ -0.37
EFNB3Q15768 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
EFNB3Q15768 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB3Q15768 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB3Q15768 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
EFNB3Q15768 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
EFNB3Q15768 SMS-201ENST00000379404 1174 ntTSL 3 BASIC12.72□□□□□ -0.37
EFNB3Q15768 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC12.72□□□□□ -0.37
EFNB3Q15768 FAM58BP-201ENST00000439056 645 ntBASIC12.72□□□□□ -0.37
EFNB3Q15768 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC12.72□□□□□ -0.37
EFNB3Q15768 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB3Q15768 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC12.72□□□□□ -0.37
EFNB3Q15768 TUBB8P8-201ENST00000458717 1058 ntBASIC12.72□□□□□ -0.37
EFNB3Q15768 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms