Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AL136172.1-201ENST00000598590 1394 ntBASIC14.64□□□□□ -0.07
CDK3Q00526 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CDK3Q00526 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CDK3Q00526 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDK3Q00526 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDK3Q00526 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDK3Q00526 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.64□□□□□ -0.07
CDK3Q00526 TUBB8P8-201ENST00000458717 1058 ntBASIC14.64□□□□□ -0.07
CDK3Q00526 AC091804.1-201ENST00000486888 567 ntBASIC14.64□□□□□ -0.07
CDK3Q00526 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDK3Q00526 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.64□□□□□ -0.07
CDK3Q00526 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDK3Q00526 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.64□□□□□ -0.07
CDK3Q00526 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.64□□□□□ -0.07
CDK3Q00526 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDK3Q00526 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.64□□□□□ -0.07
CDK3Q00526 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.64□□□□□ -0.07
CDK3Q00526 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.64□□□□□ -0.07
CDK3Q00526 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDK3Q00526 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDK3Q00526 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDK3Q00526 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CDK3Q00526 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDK3Q00526 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CDK3Q00526 AC092135.3-201ENST00000624151 1846 ntBASIC14.64□□□□□ -0.07
CDK3Q00526 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CDK3Q00526 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
CDK3Q00526 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDK3Q00526 TSPY26P-202ENST00000565928 3884 ntBASIC14.64□□□□□ -0.07
CDK3Q00526 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDK3Q00526 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDK3Q00526 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.63□□□□□ -0.07
CDK3Q00526 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.63□□□□□ -0.07
CDK3Q00526 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CDK3Q00526 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.63□□□□□ -0.07
CDK3Q00526 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.63□□□□□ -0.07
CDK3Q00526 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDK3Q00526 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.63□□□□□ -0.07
CDK3Q00526 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDK3Q00526 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDK3Q00526 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDK3Q00526 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CDK3Q00526 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDK3Q00526 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDK3Q00526 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
CDK3Q00526 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDK3Q00526 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.63□□□□□ -0.07
CDK3Q00526 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDK3Q00526 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
CDK3Q00526 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDK3Q00526 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
CDK3Q00526 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.63□□□□□ -0.07
CDK3Q00526 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDK3Q00526 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.63□□□□□ -0.07
CDK3Q00526 RNMTL1P1-201ENST00000454103 560 ntBASIC14.63□□□□□ -0.07
CDK3Q00526 CICP12-201ENST00000455801 843 ntBASIC14.63□□□□□ -0.07
CDK3Q00526 SERPINA13P-202ENST00000478994 924 ntBASIC14.63□□□□□ -0.07
CDK3Q00526 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.63□□□□□ -0.07
CDK3Q00526 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.63□□□□□ -0.07
CDK3Q00526 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.63□□□□□ -0.07
CDK3Q00526 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
CDK3Q00526 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CDK3Q00526 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDK3Q00526 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDK3Q00526 AC027601.3-201ENST00000622907 509 ntBASIC14.63□□□□□ -0.07
CDK3Q00526 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
CDK3Q00526 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDK3Q00526 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
CDK3Q00526 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDK3Q00526 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDK3Q00526 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.63□□□□□ -0.07
CDK3Q00526 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
CDK3Q00526 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDK3Q00526 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDK3Q00526 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDK3Q00526 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDK3Q00526 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDK3Q00526 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDK3Q00526 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDK3Q00526 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDK3Q00526 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDK3Q00526 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CDK3Q00526 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CDK3Q00526 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.62□□□□□ -0.07
CDK3Q00526 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDK3Q00526 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDK3Q00526 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDK3Q00526 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDK3Q00526 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDK3Q00526 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.62□□□□□ -0.07
CDK3Q00526 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.62□□□□□ -0.07
CDK3Q00526 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.62□□□□□ -0.07
CDK3Q00526 FAM58BP-201ENST00000439056 645 ntBASIC14.62□□□□□ -0.07
CDK3Q00526 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.62□□□□□ -0.07
CDK3Q00526 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.62□□□□□ -0.07
CDK3Q00526 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.62□□□□□ -0.07
CDK3Q00526 AC044849.1-201ENST00000519737 1188 ntBASIC14.62□□□□□ -0.07
CDK3Q00526 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.62□□□□□ -0.07
CDK3Q00526 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDK3Q00526 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms