Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
EFNB1P98172 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.33□□□□□ -0.28
EFNB1P98172 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.33□□□□□ -0.28
EFNB1P98172 FLJ16779-201ENST00000612722 7638 ntBASIC13.33□□□□□ -0.28
EFNB1P98172 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.33□□□□□ -0.28
EFNB1P98172 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.33□□□□□ -0.28
EFNB1P98172 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
EFNB1P98172 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
EFNB1P98172 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
EFNB1P98172 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
EFNB1P98172 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
EFNB1P98172 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.33□□□□□ -0.28
EFNB1P98172 AL157996.1-201ENST00000624684 2299 ntBASIC13.33□□□□□ -0.28
EFNB1P98172 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
EFNB1P98172 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
EFNB1P98172 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.33□□□□□ -0.28
EFNB1P98172 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
EFNB1P98172 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
EFNB1P98172 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
EFNB1P98172 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.33□□□□□ -0.28
EFNB1P98172 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
EFNB1P98172 KHSRPP1-201ENST00000427983 1768 ntBASIC13.32□□□□□ -0.28
EFNB1P98172 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB1P98172 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB1P98172 CICP20-201ENST00000443330 2801 ntBASIC13.32□□□□□ -0.28
EFNB1P98172 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.32□□□□□ -0.28
EFNB1P98172 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB1P98172 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB1P98172 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB1P98172 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
EFNB1P98172 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB1P98172 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB1P98172 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.32□□□□□ -0.28
EFNB1P98172 AC139712.1-201ENST00000378256 1875 ntBASIC13.32□□□□□ -0.28
EFNB1P98172 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB1P98172 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB1P98172 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB1P98172 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
EFNB1P98172 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
EFNB1P98172 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB1P98172 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB1P98172 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.32□□□□□ -0.28
EFNB1P98172 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.32□□□□□ -0.28
EFNB1P98172 BX842568.4-201ENST00000421222 227 ntBASIC13.32□□□□□ -0.28
EFNB1P98172 TSEN15P1-201ENST00000423257 515 ntBASIC13.32□□□□□ -0.28
EFNB1P98172 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
EFNB1P98172 AP000347.1-202ENST00000435868 847 ntBASIC13.32□□□□□ -0.28
EFNB1P98172 RPL13AP25-201ENST00000484130 612 ntBASIC13.32□□□□□ -0.28
EFNB1P98172 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.32□□□□□ -0.28
EFNB1P98172 AC008738.7-201ENST00000609744 511 ntBASIC13.32□□□□□ -0.28
EFNB1P98172 AC004790.1-201ENST00000612686 536 ntBASIC13.32□□□□□ -0.28
EFNB1P98172 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
EFNB1P98172 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB1P98172 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
EFNB1P98172 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB1P98172 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB1P98172 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
EFNB1P98172 PCDHA3-202ENST00000532566 4594 ntBASIC13.32□□□□□ -0.28
EFNB1P98172 AC068760.1-201ENST00000493579 1953 ntBASIC13.32□□□□□ -0.28
EFNB1P98172 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB1P98172 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
EFNB1P98172 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB1P98172 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
EFNB1P98172 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB1P98172 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB1P98172 AC072061.1-201ENST00000569710 2234 ntBASIC13.32□□□□□ -0.28
EFNB1P98172 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB1P98172 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB1P98172 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB1P98172 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB1P98172 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB1P98172 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB1P98172 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.32□□□□□ -0.28
EFNB1P98172 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
EFNB1P98172 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.32□□□□□ -0.28
EFNB1P98172 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.32□□□□□ -0.28
EFNB1P98172 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.32□□□□□ -0.28
EFNB1P98172 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.32□□□□□ -0.28
EFNB1P98172 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB1P98172 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.31□□□□□ -0.28
EFNB1P98172 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.31□□□□□ -0.28
EFNB1P98172 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB1P98172 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.31□□□□□ -0.28
EFNB1P98172 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
EFNB1P98172 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB1P98172 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.31□□□□□ -0.28
EFNB1P98172 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.31□□□□□ -0.28
EFNB1P98172 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB1P98172 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB1P98172 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB1P98172 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB1P98172 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
EFNB1P98172 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB1P98172 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB1P98172 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB1P98172 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB1P98172 RNU1-114P-201ENST00000365297 166 ntBASIC13.31□□□□□ -0.28
EFNB1P98172 RN7SKP230-201ENST00000365642 335 ntBASIC13.31□□□□□ -0.28
EFNB1P98172 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.31□□□□□ -0.28
EFNB1P98172 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms