Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC16.83■□□□□ 0.28
HTRA3P83110 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HTRA3P83110 AL132994.1-201ENST00000554098 400 ntBASIC16.83■□□□□ 0.28
HTRA3P83110 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC16.83■□□□□ 0.28
HTRA3P83110 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC16.83■□□□□ 0.28
HTRA3P83110 CES1P2-201ENST00000566467 1242 ntBASIC16.83■□□□□ 0.28
HTRA3P83110 RN7SL605P-201ENST00000577229 281 ntBASIC16.83■□□□□ 0.28
HTRA3P83110 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC16.83■□□□□ 0.28
HTRA3P83110 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HTRA3P83110 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
HTRA3P83110 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HTRA3P83110 AC073869.4-201ENST00000620841 800 ntBASIC16.83■□□□□ 0.28
HTRA3P83110 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HTRA3P83110 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HTRA3P83110 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HTRA3P83110 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HTRA3P83110 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.82■□□□□ 0.28
HTRA3P83110 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HTRA3P83110 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.82■□□□□ 0.28
HTRA3P83110 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC16.82■□□□□ 0.28
HTRA3P83110 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTRA3P83110 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTRA3P83110 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.82■□□□□ 0.28
HTRA3P83110 REXO1L4P-201ENST00000605109 1937 ntBASIC16.82■□□□□ 0.28
HTRA3P83110 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
HTRA3P83110 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HTRA3P83110 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HTRA3P83110 AC022532.1-201ENST00000624563 1728 ntBASIC16.82■□□□□ 0.28
HTRA3P83110 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTRA3P83110 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HTRA3P83110 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.82■□□□□ 0.28
HTRA3P83110 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HTRA3P83110 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC16.82■□□□□ 0.28
HTRA3P83110 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.82■□□□□ 0.28
HTRA3P83110 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTRA3P83110 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTRA3P83110 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
HTRA3P83110 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTRA3P83110 JTB-202ENST00000356648 1040 ntTSL 2 BASIC16.82■□□□□ 0.28
HTRA3P83110 HDGF-202ENST00000368206 960 ntTSL 5 BASIC16.82■□□□□ 0.28
HTRA3P83110 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC16.82■□□□□ 0.28
HTRA3P83110 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HTRA3P83110 FAM21EP-201ENST00000417804 985 ntBASIC16.82■□□□□ 0.28
HTRA3P83110 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC16.82■□□□□ 0.28
HTRA3P83110 AC099328.1-201ENST00000498809 1030 ntBASIC16.82■□□□□ 0.28
HTRA3P83110 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC16.82■□□□□ 0.28
HTRA3P83110 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HTRA3P83110 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HTRA3P83110 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC16.82■□□□□ 0.28
HTRA3P83110 SNORD3B-1-201ENST00000577988 758 ntBASIC16.82■□□□□ 0.28
HTRA3P83110 NAT9-204ENST00000578822 839 ntTSL 3 BASIC16.82■□□□□ 0.28
HTRA3P83110 AC009041.4-201ENST00000620075 638 ntBASIC16.82■□□□□ 0.28
HTRA3P83110 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTRA3P83110 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTRA3P83110 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTRA3P83110 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HTRA3P83110 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTRA3P83110 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTRA3P83110 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.82■□□□□ 0.28
HTRA3P83110 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTRA3P83110 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
HTRA3P83110 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
HTRA3P83110 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTRA3P83110 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTRA3P83110 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTRA3P83110 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HTRA3P83110 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.81■□□□□ 0.28
HTRA3P83110 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTRA3P83110 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC16.81■□□□□ 0.28
HTRA3P83110 AC000078.1-201ENST00000420617 682 ntBASIC16.81■□□□□ 0.28
HTRA3P83110 GRPEL2P1-201ENST00000453145 339 ntBASIC16.81■□□□□ 0.28
HTRA3P83110 AC008494.1-201ENST00000497612 796 ntBASIC16.81■□□□□ 0.28
HTRA3P83110 RN7SKP155-201ENST00000516031 288 ntBASIC16.81■□□□□ 0.28
HTRA3P83110 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HTRA3P83110 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HTRA3P83110 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC16.81■□□□□ 0.28
HTRA3P83110 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC16.81■□□□□ 0.28
HTRA3P83110 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HTRA3P83110 AL359091.4-201ENST00000610052 409 ntBASIC16.81■□□□□ 0.28
HTRA3P83110 ESR1-214ENST00000638569 132 ntTSL 5 BASIC16.81■□□□□ 0.28
HTRA3P83110 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTRA3P83110 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTRA3P83110 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTRA3P83110 AC092127.1-201ENST00000567093 3455 ntBASIC16.81■□□□□ 0.28
HTRA3P83110 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
HTRA3P83110 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.81■□□□□ 0.28
HTRA3P83110 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTRA3P83110 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTRA3P83110 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTRA3P83110 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.81■□□□□ 0.28
HTRA3P83110 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTRA3P83110 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HTRA3P83110 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTRA3P83110 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.81■□□□□ 0.28
HTRA3P83110 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC16.81■□□□□ 0.28
HTRA3P83110 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTRA3P83110 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTRA3P83110 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
HTRA3P83110 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HTRA3P83110 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms