Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.16■□□□□ 0.18
SNRPFP62306 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.16■□□□□ 0.18
SNRPFP62306 AC027601.3-201ENST00000622907 509 ntBASIC16.16■□□□□ 0.18
SNRPFP62306 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
SNRPFP62306 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SNRPFP62306 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNRPFP62306 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNRPFP62306 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNRPFP62306 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
SNRPFP62306 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.16■□□□□ 0.18
SNRPFP62306 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNRPFP62306 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNRPFP62306 KRT8P4-201ENST00000509735 1454 ntBASIC16.16■□□□□ 0.18
SNRPFP62306 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
SNRPFP62306 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SNRPFP62306 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SNRPFP62306 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.15■□□□□ 0.18
SNRPFP62306 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
SNRPFP62306 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC16.15■□□□□ 0.18
SNRPFP62306 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNRPFP62306 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNRPFP62306 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SNRPFP62306 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SNRPFP62306 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNRPFP62306 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNRPFP62306 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNRPFP62306 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNRPFP62306 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SNRPFP62306 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.15■□□□□ 0.18
SNRPFP62306 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNRPFP62306 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNRPFP62306 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.15■□□□□ 0.18
SNRPFP62306 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNRPFP62306 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNRPFP62306 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNRPFP62306 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNRPFP62306 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNRPFP62306 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.15■□□□□ 0.18
SNRPFP62306 SHC1P1-201ENST00000425230 1745 ntBASIC16.15■□□□□ 0.18
SNRPFP62306 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNRPFP62306 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.15■□□□□ 0.18
SNRPFP62306 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNRPFP62306 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.15■□□□□ 0.18
SNRPFP62306 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.15■□□□□ 0.18
SNRPFP62306 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.15■□□□□ 0.18
SNRPFP62306 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SNRPFP62306 SNX29P1-201ENST00000548357 1007 ntBASIC16.15■□□□□ 0.18
SNRPFP62306 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SNRPFP62306 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SNRPFP62306 AC017083.2-201ENST00000608069 979 ntBASIC16.15■□□□□ 0.18
SNRPFP62306 COX11-210ENST00000639671 696 ntBASIC16.15■□□□□ 0.18
SNRPFP62306 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNRPFP62306 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNRPFP62306 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SNRPFP62306 AP001267.2-201ENST00000532619 2086 ntBASIC16.15■□□□□ 0.18
SNRPFP62306 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNRPFP62306 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
SNRPFP62306 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNRPFP62306 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SNRPFP62306 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
SNRPFP62306 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SNRPFP62306 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SNRPFP62306 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.15■□□□□ 0.18
SNRPFP62306 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.15■□□□□ 0.18
SNRPFP62306 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SNRPFP62306 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNRPFP62306 AC090505.1-201ENST00000430515 1834 ntBASIC16.15■□□□□ 0.18
SNRPFP62306 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNRPFP62306 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNRPFP62306 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.14■□□□□ 0.17
SNRPFP62306 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNRPFP62306 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.14■□□□□ 0.17
SNRPFP62306 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNRPFP62306 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.14■□□□□ 0.17
SNRPFP62306 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SNRPFP62306 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SNRPFP62306 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNRPFP62306 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.14■□□□□ 0.17
SNRPFP62306 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNRPFP62306 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNRPFP62306 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
SNRPFP62306 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SNRPFP62306 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNRPFP62306 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
SNRPFP62306 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNRPFP62306 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.14■□□□□ 0.17
SNRPFP62306 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNRPFP62306 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
SNRPFP62306 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.14■□□□□ 0.17
SNRPFP62306 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.14■□□□□ 0.17
SNRPFP62306 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.14■□□□□ 0.17
SNRPFP62306 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.14■□□□□ 0.17
SNRPFP62306 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SNRPFP62306 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.14■□□□□ 0.17
SNRPFP62306 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.14■□□□□ 0.17
SNRPFP62306 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SNRPFP62306 AC133552.6-201ENST00000613406 534 ntBASIC16.14■□□□□ 0.17
SNRPFP62306 MIR6805-201ENST00000615055 62 ntBASIC16.14■□□□□ 0.17
SNRPFP62306 AL136301.1-201ENST00000615830 422 ntBASIC16.14■□□□□ 0.17
SNRPFP62306 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms