Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CDC42P60953 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42P60953 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42P60953 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42P60953 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42P60953 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.73□□□□□ -0.21
CDC42P60953 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42P60953 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42P60953 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42P60953 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42P60953 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42P60953 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CDC42P60953 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CDC42P60953 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42P60953 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42P60953 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.73□□□□□ -0.21
CDC42P60953 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42P60953 TMEM198B-204ENST00000484016 896 ntBASIC13.73□□□□□ -0.21
CDC42P60953 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CDC42P60953 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.73□□□□□ -0.21
CDC42P60953 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42P60953 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.73□□□□□ -0.21
CDC42P60953 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.73□□□□□ -0.21
CDC42P60953 AL121894.2-201ENST00000602977 491 ntBASIC13.73□□□□□ -0.21
CDC42P60953 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42P60953 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42P60953 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.73□□□□□ -0.21
CDC42P60953 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42P60953 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CDC42P60953 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42P60953 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42P60953 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42P60953 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CDC42P60953 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42P60953 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.73□□□□□ -0.21
CDC42P60953 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42P60953 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42P60953 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42P60953 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CDC42P60953 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42P60953 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42P60953 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CDC42P60953 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42P60953 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42P60953 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42P60953 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.73□□□□□ -0.21
CDC42P60953 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
CDC42P60953 CICP8-201ENST00000455800 2813 ntBASIC13.72□□□□□ -0.21
CDC42P60953 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.72□□□□□ -0.21
CDC42P60953 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CDC42P60953 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CDC42P60953 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CDC42P60953 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CDC42P60953 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.72□□□□□ -0.21
CDC42P60953 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CDC42P60953 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.72□□□□□ -0.21
CDC42P60953 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.72□□□□□ -0.21
CDC42P60953 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42P60953 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42P60953 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42P60953 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42P60953 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42P60953 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CDC42P60953 AC092053.3-201ENST00000641308 4975 ntBASIC13.72□□□□□ -0.21
CDC42P60953 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42P60953 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42P60953 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.72□□□□□ -0.21
CDC42P60953 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42P60953 MCCD1P2-201ENST00000423228 335 ntBASIC13.72□□□□□ -0.21
CDC42P60953 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.72□□□□□ -0.21
CDC42P60953 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.72□□□□□ -0.21
CDC42P60953 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
CDC42P60953 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.72□□□□□ -0.21
CDC42P60953 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.72□□□□□ -0.21
CDC42P60953 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CDC42P60953 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.72□□□□□ -0.21
CDC42P60953 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.72□□□□□ -0.21
CDC42P60953 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42P60953 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CDC42P60953 C20orf181-201ENST00000623918 480 ntBASIC13.72□□□□□ -0.21
CDC42P60953 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42P60953 AL033527.5-202ENST00000641632 1098 ntBASIC13.72□□□□□ -0.21
CDC42P60953 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42P60953 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42P60953 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42P60953 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.72□□□□□ -0.21
CDC42P60953 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42P60953 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CDC42P60953 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CDC42P60953 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42P60953 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.72□□□□□ -0.21
CDC42P60953 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42P60953 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42P60953 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.72□□□□□ -0.21
CDC42P60953 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42P60953 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CDC42P60953 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42P60953 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.72□□□□□ -0.21
CDC42P60953 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CDC42P60953 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms