Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN20P56880 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN20P56880 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN20P56880 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CLDN20P56880 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN20P56880 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN20P56880 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.76□□□□□ -0.21
CLDN20P56880 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.76□□□□□ -0.21
CLDN20P56880 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN20P56880 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CLDN20P56880 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.76□□□□□ -0.21
CLDN20P56880 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN20P56880 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN20P56880 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN20P56880 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN20P56880 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN20P56880 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN20P56880 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN20P56880 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN20P56880 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN20P56880 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN20P56880 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN20P56880 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.76□□□□□ -0.21
CLDN20P56880 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN20P56880 ARSEP1-201ENST00000420443 635 ntBASIC13.76□□□□□ -0.21
CLDN20P56880 NUS1P3-201ENST00000423502 862 ntBASIC13.76□□□□□ -0.21
CLDN20P56880 KRT43P-201ENST00000434019 910 ntBASIC13.76□□□□□ -0.21
CLDN20P56880 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.76□□□□□ -0.21
CLDN20P56880 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.76□□□□□ -0.21
CLDN20P56880 ACA64.2-201ENST00000459014 129 ntBASIC13.76□□□□□ -0.21
CLDN20P56880 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.76□□□□□ -0.21
CLDN20P56880 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CLDN20P56880 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.76□□□□□ -0.21
CLDN20P56880 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.76□□□□□ -0.21
CLDN20P56880 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CLDN20P56880 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN20P56880 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.76□□□□□ -0.21
CLDN20P56880 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.76□□□□□ -0.21
CLDN20P56880 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.76□□□□□ -0.21
CLDN20P56880 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.76□□□□□ -0.21
CLDN20P56880 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.76□□□□□ -0.21
CLDN20P56880 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN20P56880 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.76□□□□□ -0.21
CLDN20P56880 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.76□□□□□ -0.21
CLDN20P56880 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CLDN20P56880 PRSS30P-206ENST00000641773 873 ntBASIC13.76□□□□□ -0.21
CLDN20P56880 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CLDN20P56880 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.76□□□□□ -0.21
CLDN20P56880 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN20P56880 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.76□□□□□ -0.21
CLDN20P56880 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CLDN20P56880 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.76□□□□□ -0.21
CLDN20P56880 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CLDN20P56880 REXO1L4P-201ENST00000605109 1937 ntBASIC13.76□□□□□ -0.21
CLDN20P56880 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN20P56880 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.76□□□□□ -0.21
CLDN20P56880 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
CLDN20P56880 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN20P56880 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CLDN20P56880 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.76□□□□□ -0.21
CLDN20P56880 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN20P56880 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN20P56880 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN20P56880 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN20P56880 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.75□□□□□ -0.21
CLDN20P56880 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.75□□□□□ -0.21
CLDN20P56880 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN20P56880 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CLDN20P56880 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.75□□□□□ -0.21
CLDN20P56880 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CLDN20P56880 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN20P56880 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CLDN20P56880 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN20P56880 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN20P56880 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
CLDN20P56880 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN20P56880 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.75□□□□□ -0.21
CLDN20P56880 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN20P56880 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN20P56880 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN20P56880 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN20P56880 KRT8P35-201ENST00000483942 1338 ntBASIC13.75□□□□□ -0.21
CLDN20P56880 AL157414.3-201ENST00000624276 1954 ntBASIC13.75□□□□□ -0.21
CLDN20P56880 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CLDN20P56880 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CLDN20P56880 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN20P56880 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN20P56880 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN20P56880 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.75□□□□□ -0.21
CLDN20P56880 AC092933.1-201ENST00000393644 945 ntBASIC13.75□□□□□ -0.21
CLDN20P56880 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.75□□□□□ -0.21
CLDN20P56880 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.75□□□□□ -0.21
CLDN20P56880 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN20P56880 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.75□□□□□ -0.21
CLDN20P56880 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.75□□□□□ -0.21
CLDN20P56880 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CLDN20P56880 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN20P56880 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN20P56880 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CLDN20P56880 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms