Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.5□□□□□ -0.25
SUMO3P55854 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SUMO3P55854 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.5□□□□□ -0.25
SUMO3P55854 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SUMO3P55854 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SUMO3P55854 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SUMO3P55854 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SUMO3P55854 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
SUMO3P55854 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SUMO3P55854 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SUMO3P55854 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SUMO3P55854 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SUMO3P55854 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SUMO3P55854 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SUMO3P55854 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SUMO3P55854 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.5□□□□□ -0.25
SUMO3P55854 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SUMO3P55854 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.49□□□□□ -0.25
SUMO3P55854 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SUMO3P55854 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SUMO3P55854 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
SUMO3P55854 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SUMO3P55854 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SUMO3P55854 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SUMO3P55854 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SUMO3P55854 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SUMO3P55854 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SUMO3P55854 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SUMO3P55854 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SUMO3P55854 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SUMO3P55854 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SUMO3P55854 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SUMO3P55854 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.49□□□□□ -0.25
SUMO3P55854 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
SUMO3P55854 AC140479.7-201ENST00000636301 2332 ntBASIC13.49□□□□□ -0.25
SUMO3P55854 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SUMO3P55854 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
SUMO3P55854 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SUMO3P55854 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.49□□□□□ -0.25
SUMO3P55854 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.49□□□□□ -0.25
SUMO3P55854 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.49□□□□□ -0.25
SUMO3P55854 AL035414.1-201ENST00000451327 857 ntBASIC13.49□□□□□ -0.25
SUMO3P55854 HOMER2P2-201ENST00000451621 847 ntBASIC13.49□□□□□ -0.25
SUMO3P55854 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SUMO3P55854 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.49□□□□□ -0.25
SUMO3P55854 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.49□□□□□ -0.25
SUMO3P55854 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SUMO3P55854 PPY2P-201ENST00000582808 702 ntBASIC13.49□□□□□ -0.25
SUMO3P55854 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SUMO3P55854 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.49□□□□□ -0.25
SUMO3P55854 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SUMO3P55854 AC133552.6-201ENST00000613406 534 ntBASIC13.49□□□□□ -0.25
SUMO3P55854 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.49□□□□□ -0.25
SUMO3P55854 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.49□□□□□ -0.25
SUMO3P55854 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
SUMO3P55854 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SUMO3P55854 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SUMO3P55854 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.49□□□□□ -0.25
SUMO3P55854 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SUMO3P55854 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
SUMO3P55854 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SUMO3P55854 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.49□□□□□ -0.25
SUMO3P55854 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SUMO3P55854 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SUMO3P55854 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SUMO3P55854 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SUMO3P55854 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
SUMO3P55854 AL590440.2-201ENST00000641973 1595 ntBASIC13.49□□□□□ -0.25
SUMO3P55854 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SUMO3P55854 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SUMO3P55854 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.49□□□□□ -0.25
SUMO3P55854 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SUMO3P55854 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
SUMO3P55854 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
SUMO3P55854 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SUMO3P55854 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SUMO3P55854 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SUMO3P55854 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SUMO3P55854 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SUMO3P55854 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SUMO3P55854 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SUMO3P55854 AC067750.1-201ENST00000608826 6545 ntBASIC13.48□□□□□ -0.25
SUMO3P55854 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SUMO3P55854 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
SUMO3P55854 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SUMO3P55854 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.48□□□□□ -0.25
SUMO3P55854 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.48□□□□□ -0.25
SUMO3P55854 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SUMO3P55854 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SUMO3P55854 AC009093.2-202ENST00000620513 2079 ntBASIC13.48□□□□□ -0.25
SUMO3P55854 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
SUMO3P55854 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SUMO3P55854 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SUMO3P55854 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SUMO3P55854 ANKRD19P-201ENST00000338192 862 ntBASIC13.48□□□□□ -0.25
SUMO3P55854 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SUMO3P55854 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
SUMO3P55854 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SUMO3P55854 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.48□□□□□ -0.25
SUMO3P55854 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms