Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 KRTAP10-13P-201ENST00000412914 571 ntBASIC10.95□□□□□ -0.66
APOC4P55056 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC10.95□□□□□ -0.66
APOC4P55056 FAM58BP-201ENST00000439056 645 ntBASIC10.95□□□□□ -0.66
APOC4P55056 HIST2H2BB-201ENST00000449108 381 ntBASIC10.95□□□□□ -0.66
APOC4P55056 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 OARD1-212ENST00000482515 832 ntTSL 2 BASIC10.95□□□□□ -0.66
APOC4P55056 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC10.95□□□□□ -0.66
APOC4P55056 NOP2-211ENST00000540228 668 ntTSL 2 BASIC10.95□□□□□ -0.66
APOC4P55056 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC10.95□□□□□ -0.66
APOC4P55056 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC10.95□□□□□ -0.66
APOC4P55056 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC10.95□□□□□ -0.66
APOC4P55056 AC004466.1-201ENST00000599515 1080 ntBASIC10.95□□□□□ -0.66
APOC4P55056 AC008825.2-201ENST00000603374 718 ntBASIC10.95□□□□□ -0.66
APOC4P55056 AC007663.3-201ENST00000609632 465 ntBASIC10.95□□□□□ -0.66
APOC4P55056 AP001002.3-201ENST00000623482 206 ntBASIC10.95□□□□□ -0.66
APOC4P55056 AL008638.5-201ENST00000623814 1298 ntBASIC10.95□□□□□ -0.66
APOC4P55056 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC10.95□□□□□ -0.66
APOC4P55056 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
APOC4P55056 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
APOC4P55056 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 DMBT1P1-203ENST00000636837 4628 ntBASIC10.95□□□□□ -0.66
APOC4P55056 AC008741.2-201ENST00000612792 3115 ntBASIC10.95□□□□□ -0.66
APOC4P55056 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC10.95□□□□□ -0.66
APOC4P55056 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC10.95□□□□□ -0.66
APOC4P55056 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
APOC4P55056 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC10.95□□□□□ -0.66
APOC4P55056 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC10.94□□□□□ -0.66
APOC4P55056 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
APOC4P55056 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
APOC4P55056 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
APOC4P55056 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC10.94□□□□□ -0.66
APOC4P55056 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
APOC4P55056 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
APOC4P55056 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
APOC4P55056 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
APOC4P55056 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
APOC4P55056 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
APOC4P55056 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
APOC4P55056 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
APOC4P55056 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC10.94□□□□□ -0.66
APOC4P55056 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
APOC4P55056 AL359258.3-201ENST00000622910 2331 ntBASIC10.94□□□□□ -0.66
APOC4P55056 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
APOC4P55056 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
APOC4P55056 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
APOC4P55056 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
APOC4P55056 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
APOC4P55056 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
APOC4P55056 CHMP1AP1-201ENST00000445563 662 ntBASIC10.94□□□□□ -0.66
APOC4P55056 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
APOC4P55056 AC099548.2-209ENST00000480264 625 ntBASIC10.94□□□□□ -0.66
APOC4P55056 AC106794.1-201ENST00000506935 792 ntBASIC10.94□□□□□ -0.66
APOC4P55056 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
APOC4P55056 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC10.94□□□□□ -0.66
APOC4P55056 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
APOC4P55056 AC020914.3-201ENST00000594712 304 ntBASIC10.94□□□□□ -0.66
APOC4P55056 AL096828.3-201ENST00000615354 462 ntBASIC10.94□□□□□ -0.66
APOC4P55056 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC10.94□□□□□ -0.66
APOC4P55056 MIR6787-201ENST00000616675 61 ntBASIC10.94□□□□□ -0.66
APOC4P55056 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
APOC4P55056 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
APOC4P55056 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC10.94□□□□□ -0.66
APOC4P55056 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
APOC4P55056 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
APOC4P55056 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC10.94□□□□□ -0.66
APOC4P55056 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
APOC4P55056 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
APOC4P55056 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
APOC4P55056 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
APOC4P55056 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC10.94□□□□□ -0.66
APOC4P55056 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
APOC4P55056 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
APOC4P55056 AL133338.1-201ENST00000565695 1517 ntBASIC10.94□□□□□ -0.66
APOC4P55056 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC10.94□□□□□ -0.66
APOC4P55056 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
APOC4P55056 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC10.93□□□□□ -0.66
APOC4P55056 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC10.93□□□□□ -0.66
APOC4P55056 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC10.93□□□□□ -0.66
APOC4P55056 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC10.93□□□□□ -0.66
APOC4P55056 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
APOC4P55056 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
APOC4P55056 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC10.93□□□□□ -0.66
APOC4P55056 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms