Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATXN3P54252 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
ATXN3P54252 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATXN3P54252 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATXN3P54252 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATXN3P54252 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
ATXN3P54252 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATXN3P54252 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATXN3P54252 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATXN3P54252 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.39■□□□□ 0.05
ATXN3P54252 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATXN3P54252 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ATXN3P54252 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ATXN3P54252 RNA5SP423-201ENST00000517127 109 ntBASIC15.39■□□□□ 0.05
ATXN3P54252 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
ATXN3P54252 AC025279.2-201ENST00000569730 653 ntBASIC15.39■□□□□ 0.05
ATXN3P54252 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.39■□□□□ 0.05
ATXN3P54252 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.39■□□□□ 0.05
ATXN3P54252 AC020914.3-201ENST00000594712 304 ntBASIC15.39■□□□□ 0.05
ATXN3P54252 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.39■□□□□ 0.05
ATXN3P54252 AL021578.1-201ENST00000613646 709 ntBASIC15.39■□□□□ 0.05
ATXN3P54252 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.39■□□□□ 0.05
ATXN3P54252 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
ATXN3P54252 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
ATXN3P54252 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
ATXN3P54252 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATXN3P54252 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.39■□□□□ 0.05
ATXN3P54252 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.39■□□□□ 0.05
ATXN3P54252 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.39■□□□□ 0.05
ATXN3P54252 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATXN3P54252 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ATXN3P54252 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ATXN3P54252 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ATXN3P54252 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATXN3P54252 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ATXN3P54252 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
ATXN3P54252 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
ATXN3P54252 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
ATXN3P54252 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.39■□□□□ 0.05
ATXN3P54252 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.39■□□□□ 0.05
ATXN3P54252 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.39■□□□□ 0.05
ATXN3P54252 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATXN3P54252 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATXN3P54252 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATXN3P54252 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
ATXN3P54252 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.38■□□□□ 0.05
ATXN3P54252 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ATXN3P54252 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATXN3P54252 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.38■□□□□ 0.05
ATXN3P54252 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
ATXN3P54252 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
ATXN3P54252 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATXN3P54252 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATXN3P54252 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATXN3P54252 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATXN3P54252 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
ATXN3P54252 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATXN3P54252 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.38■□□□□ 0.05
ATXN3P54252 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
ATXN3P54252 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATXN3P54252 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATXN3P54252 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.38■□□□□ 0.05
ATXN3P54252 AC007969.1-201ENST00000433675 447 ntBASIC15.38■□□□□ 0.05
ATXN3P54252 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC15.38■□□□□ 0.05
ATXN3P54252 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.38■□□□□ 0.05
ATXN3P54252 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.38■□□□□ 0.05
ATXN3P54252 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.38■□□□□ 0.05
ATXN3P54252 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.38■□□□□ 0.05
ATXN3P54252 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
ATXN3P54252 MIR4741-201ENST00000579822 90 ntBASIC15.38■□□□□ 0.05
ATXN3P54252 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
ATXN3P54252 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.38■□□□□ 0.05
ATXN3P54252 AL008638.5-201ENST00000623814 1298 ntBASIC15.38■□□□□ 0.05
ATXN3P54252 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ATXN3P54252 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATXN3P54252 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
ATXN3P54252 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATXN3P54252 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATXN3P54252 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.38■□□□□ 0.05
ATXN3P54252 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATXN3P54252 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ATXN3P54252 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ATXN3P54252 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.38■□□□□ 0.05
ATXN3P54252 AC112693.3-201ENST00000624819 1983 ntBASIC15.38■□□□□ 0.05
ATXN3P54252 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.38■□□□□ 0.05
ATXN3P54252 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.38■□□□□ 0.05
ATXN3P54252 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.38■□□□□ 0.05
ATXN3P54252 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
ATXN3P54252 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATXN3P54252 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATXN3P54252 LINC00528-201ENST00000600723 2160 ntBASIC15.38■□□□□ 0.05
ATXN3P54252 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ATXN3P54252 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATXN3P54252 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATXN3P54252 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.37■□□□□ 0.05
ATXN3P54252 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ATXN3P54252 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
ATXN3P54252 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.37■□□□□ 0.05
ATXN3P54252 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.37■□□□□ 0.05
ATXN3P54252 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms