Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRCC3P46736 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRCC3P46736 MIR3619-201ENST00000579667 83 ntBASIC15.81■□□□□ 0.12
BRCC3P46736 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRCC3P46736 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.81■□□□□ 0.12
BRCC3P46736 AC097724.1-201ENST00000609581 426 ntBASIC15.81■□□□□ 0.12
BRCC3P46736 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRCC3P46736 AP001505.2-201ENST00000616815 443 ntBASIC15.81■□□□□ 0.12
BRCC3P46736 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.81■□□□□ 0.12
BRCC3P46736 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.81■□□□□ 0.12
BRCC3P46736 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRCC3P46736 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRCC3P46736 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.81■□□□□ 0.12
BRCC3P46736 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRCC3P46736 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRCC3P46736 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRCC3P46736 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BRCC3P46736 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.81■□□□□ 0.12
BRCC3P46736 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BRCC3P46736 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRCC3P46736 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BRCC3P46736 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
BRCC3P46736 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
BRCC3P46736 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.8■□□□□ 0.12
BRCC3P46736 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRCC3P46736 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BRCC3P46736 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
BRCC3P46736 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.8■□□□□ 0.12
BRCC3P46736 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BRCC3P46736 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BRCC3P46736 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
BRCC3P46736 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
BRCC3P46736 AC008132.1-202ENST00000342005 1389 ntBASIC15.8■□□□□ 0.12
BRCC3P46736 AL136172.1-201ENST00000598590 1394 ntBASIC15.8■□□□□ 0.12
BRCC3P46736 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRCC3P46736 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRCC3P46736 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BRCC3P46736 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
BRCC3P46736 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRCC3P46736 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
BRCC3P46736 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BRCC3P46736 FAM58BP-201ENST00000439056 645 ntBASIC15.8■□□□□ 0.12
BRCC3P46736 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC15.8■□□□□ 0.12
BRCC3P46736 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.8■□□□□ 0.12
BRCC3P46736 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
BRCC3P46736 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
BRCC3P46736 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
BRCC3P46736 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.8■□□□□ 0.12
BRCC3P46736 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.8■□□□□ 0.12
BRCC3P46736 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.8■□□□□ 0.12
BRCC3P46736 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.8■□□□□ 0.12
BRCC3P46736 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.8■□□□□ 0.12
BRCC3P46736 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRCC3P46736 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BRCC3P46736 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRCC3P46736 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
BRCC3P46736 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRCC3P46736 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.8■□□□□ 0.12
BRCC3P46736 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRCC3P46736 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.8■□□□□ 0.12
BRCC3P46736 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
BRCC3P46736 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.8■□□□□ 0.12
BRCC3P46736 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
BRCC3P46736 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRCC3P46736 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
BRCC3P46736 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BRCC3P46736 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRCC3P46736 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
BRCC3P46736 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BRCC3P46736 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BRCC3P46736 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BRCC3P46736 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BRCC3P46736 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.79■□□□□ 0.12
BRCC3P46736 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BRCC3P46736 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
BRCC3P46736 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BRCC3P46736 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BRCC3P46736 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BRCC3P46736 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BRCC3P46736 NORAD-201ENST00000565493 5339 ntBASIC15.79■□□□□ 0.12
BRCC3P46736 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BRCC3P46736 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
BRCC3P46736 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BRCC3P46736 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
BRCC3P46736 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.79■□□□□ 0.12
BRCC3P46736 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
BRCC3P46736 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BRCC3P46736 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BRCC3P46736 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BRCC3P46736 AL157407.1-201ENST00000435784 904 ntBASIC15.79■□□□□ 0.12
BRCC3P46736 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC15.79■□□□□ 0.12
BRCC3P46736 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.79■□□□□ 0.12
BRCC3P46736 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.79■□□□□ 0.12
BRCC3P46736 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.79■□□□□ 0.12
BRCC3P46736 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.79■□□□□ 0.12
BRCC3P46736 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.79■□□□□ 0.12
BRCC3P46736 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BRCC3P46736 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BRCC3P46736 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC15.79■□□□□ 0.12
BRCC3P46736 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms