Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6V1AP38606 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6V1AP38606 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6V1AP38606 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
ATP6V1AP38606 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6V1AP38606 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6V1AP38606 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ATP6V1AP38606 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.8■□□□□ 0.6
ATP6V1AP38606 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6V1AP38606 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
ATP6V1AP38606 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC18.8■□□□□ 0.6
ATP6V1AP38606 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6V1AP38606 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ATP6V1AP38606 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.8■□□□□ 0.6
ATP6V1AP38606 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6V1AP38606 HYMAI-201ENST00000635591 3347 ntBASIC18.8■□□□□ 0.6
ATP6V1AP38606 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6V1AP38606 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6V1AP38606 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6V1AP38606 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6V1AP38606 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC18.8■□□□□ 0.6
ATP6V1AP38606 RHEB-207ENST00000496004 744 ntTSL 2 BASIC18.8■□□□□ 0.6
ATP6V1AP38606 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6V1AP38606 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC18.8■□□□□ 0.6
ATP6V1AP38606 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6V1AP38606 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6V1AP38606 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6V1AP38606 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6V1AP38606 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
ATP6V1AP38606 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ATP6V1AP38606 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6V1AP38606 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ATP6V1AP38606 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC18.8■□□□□ 0.6
ATP6V1AP38606 AC020658.6-201ENST00000623564 1870 ntBASIC18.8■□□□□ 0.6
ATP6V1AP38606 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ATP6V1AP38606 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V1AP38606 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V1AP38606 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V1AP38606 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.79■□□□□ 0.6
ATP6V1AP38606 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC18.79■□□□□ 0.6
ATP6V1AP38606 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V1AP38606 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V1AP38606 F10-203ENST00000409306 1450 ntTSL 3 BASIC18.79■□□□□ 0.6
ATP6V1AP38606 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V1AP38606 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V1AP38606 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC18.79■□□□□ 0.6
ATP6V1AP38606 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V1AP38606 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V1AP38606 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V1AP38606 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC18.79■□□□□ 0.6
ATP6V1AP38606 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V1AP38606 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ATP6V1AP38606 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V1AP38606 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V1AP38606 MIR1227-201ENST00000408484 88 ntBASIC18.79■□□□□ 0.6
ATP6V1AP38606 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V1AP38606 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V1AP38606 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V1AP38606 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC18.79■□□□□ 0.6
ATP6V1AP38606 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC18.79■□□□□ 0.6
ATP6V1AP38606 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC18.79■□□□□ 0.6
ATP6V1AP38606 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC18.79■□□□□ 0.6
ATP6V1AP38606 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC18.79■□□□□ 0.6
ATP6V1AP38606 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC18.79■□□□□ 0.6
ATP6V1AP38606 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC18.79■□□□□ 0.6
ATP6V1AP38606 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC18.79■□□□□ 0.6
ATP6V1AP38606 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V1AP38606 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC18.79■□□□□ 0.6
ATP6V1AP38606 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC18.79■□□□□ 0.6
ATP6V1AP38606 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ATP6V1AP38606 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V1AP38606 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V1AP38606 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V1AP38606 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V1AP38606 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.79■□□□□ 0.6
ATP6V1AP38606 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V1AP38606 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V1AP38606 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V1AP38606 HLA-DQB1-202ENST00000399079 1501 ntBASIC18.79■□□□□ 0.6
ATP6V1AP38606 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC18.79■□□□□ 0.6
ATP6V1AP38606 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC18.79■□□□□ 0.6
ATP6V1AP38606 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V1AP38606 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.79■□□□□ 0.6
ATP6V1AP38606 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V1AP38606 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V1AP38606 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V1AP38606 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V1AP38606 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6V1AP38606 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
ATP6V1AP38606 C18orf15-201ENST00000623680 2534 ntBASIC18.78■□□□□ 0.6
ATP6V1AP38606 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6V1AP38606 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.78■□□□□ 0.6
ATP6V1AP38606 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC18.78■□□□□ 0.6
ATP6V1AP38606 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6V1AP38606 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6V1AP38606 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ATP6V1AP38606 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6V1AP38606 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6V1AP38606 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6V1AP38606 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms