Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM4SF1P30408 BRD7P5-201ENST00000299197 1822 ntBASIC18.15■□□□□ 0.5
TM4SF1P30408 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC18.15■□□□□ 0.5
TM4SF1P30408 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC18.15■□□□□ 0.5
TM4SF1P30408 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC18.15■□□□□ 0.5
TM4SF1P30408 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC18.15■□□□□ 0.5
TM4SF1P30408 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC18.15■□□□□ 0.5
TM4SF1P30408 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC18.15■□□□□ 0.5
TM4SF1P30408 AP003392.6-201ENST00000607709 325 ntBASIC18.15■□□□□ 0.5
TM4SF1P30408 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.15■□□□□ 0.5
TM4SF1P30408 AL672207.1-201ENST00000328462 1570 ntBASIC18.15■□□□□ 0.5
TM4SF1P30408 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM4SF1P30408 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM4SF1P30408 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM4SF1P30408 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TM4SF1P30408 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TM4SF1P30408 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.15■□□□□ 0.5
TM4SF1P30408 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC18.15■□□□□ 0.5
TM4SF1P30408 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TM4SF1P30408 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.15■□□□□ 0.5
TM4SF1P30408 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TM4SF1P30408 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
TM4SF1P30408 KHSRPP1-201ENST00000427983 1768 ntBASIC18.14■□□□□ 0.5
TM4SF1P30408 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.14■□□□□ 0.5
TM4SF1P30408 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
TM4SF1P30408 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.14■□□□□ 0.5
TM4SF1P30408 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC18.14■□□□□ 0.5
TM4SF1P30408 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC18.14■□□□□ 0.49
TM4SF1P30408 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TM4SF1P30408 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TM4SF1P30408 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TM4SF1P30408 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TM4SF1P30408 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TM4SF1P30408 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TM4SF1P30408 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC18.14■□□□□ 0.49
TM4SF1P30408 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TM4SF1P30408 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TM4SF1P30408 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TM4SF1P30408 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC18.14■□□□□ 0.49
TM4SF1P30408 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TM4SF1P30408 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TM4SF1P30408 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC18.14■□□□□ 0.49
TM4SF1P30408 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC18.14■□□□□ 0.49
TM4SF1P30408 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC18.14■□□□□ 0.49
TM4SF1P30408 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC18.14■□□□□ 0.49
TM4SF1P30408 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC18.14■□□□□ 0.49
TM4SF1P30408 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC18.14■□□□□ 0.49
TM4SF1P30408 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TM4SF1P30408 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
TM4SF1P30408 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TM4SF1P30408 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TM4SF1P30408 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TM4SF1P30408 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TM4SF1P30408 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TM4SF1P30408 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.13■□□□□ 0.49
TM4SF1P30408 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF1P30408 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF1P30408 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF1P30408 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TM4SF1P30408 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF1P30408 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.13■□□□□ 0.49
TM4SF1P30408 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.13■□□□□ 0.49
TM4SF1P30408 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF1P30408 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF1P30408 CICP23-201ENST00000605013 2741 ntBASIC18.13■□□□□ 0.49
TM4SF1P30408 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.13■□□□□ 0.49
TM4SF1P30408 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF1P30408 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TM4SF1P30408 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC18.13■□□□□ 0.49
TM4SF1P30408 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TM4SF1P30408 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC18.13■□□□□ 0.49
TM4SF1P30408 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF1P30408 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC18.13■□□□□ 0.49
TM4SF1P30408 AC226150.1-201ENST00000544259 466 ntBASIC18.13■□□□□ 0.49
TM4SF1P30408 ELP5-212ENST00000574255 671 ntTSL 2 BASIC18.13■□□□□ 0.49
TM4SF1P30408 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC18.13■□□□□ 0.49
TM4SF1P30408 AL591471.1-201ENST00000621855 229 ntBASIC18.13■□□□□ 0.49
TM4SF1P30408 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF1P30408 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF1P30408 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC18.13■□□□□ 0.49
TM4SF1P30408 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TM4SF1P30408 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF1P30408 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF1P30408 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
TM4SF1P30408 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TM4SF1P30408 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TM4SF1P30408 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TM4SF1P30408 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TM4SF1P30408 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TM4SF1P30408 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TM4SF1P30408 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TM4SF1P30408 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TM4SF1P30408 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TM4SF1P30408 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.12■□□□□ 0.49
TM4SF1P30408 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TM4SF1P30408 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TM4SF1P30408 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TM4SF1P30408 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TM4SF1P30408 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TM4SF1P30408 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms