Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.05□□□□□ -0.16
CHMP24386 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.05□□□□□ -0.16
CHMP24386 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CHMP24386 KRT8P22-201ENST00000562317 1415 ntBASIC14.05□□□□□ -0.16
CHMP24386 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHMP24386 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CHMP24386 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHMP24386 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHMP24386 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.05□□□□□ -0.16
CHMP24386 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHMP24386 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHMP24386 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHMP24386 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CHMP24386 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHMP24386 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHMP24386 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.05□□□□□ -0.16
CHMP24386 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHMP24386 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHMP24386 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.04□□□□□ -0.16
CHMP24386 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.04□□□□□ -0.16
CHMP24386 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CHMP24386 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.04□□□□□ -0.16
CHMP24386 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHMP24386 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.04□□□□□ -0.16
CHMP24386 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHMP24386 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.04□□□□□ -0.16
CHMP24386 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.04□□□□□ -0.16
CHMP24386 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHMP24386 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CHMP24386 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHMP24386 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CHMP24386 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHMP24386 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHMP24386 GK-202ENST00000378941 458 ntTSL 3 BASIC14.04□□□□□ -0.16
CHMP24386 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.04□□□□□ -0.16
CHMP24386 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHMP24386 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHMP24386 AC244107.1-201ENST00000442033 332 ntBASIC14.04□□□□□ -0.16
CHMP24386 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.04□□□□□ -0.16
CHMP24386 INE1-201ENST00000456273 945 ntBASIC14.04□□□□□ -0.16
CHMP24386 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHMP24386 GIMAP3P-201ENST00000495150 836 ntBASIC14.04□□□□□ -0.16
CHMP24386 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.04□□□□□ -0.16
CHMP24386 AC026410.3-201ENST00000514280 936 ntBASIC14.04□□□□□ -0.16
CHMP24386 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.04□□□□□ -0.16
CHMP24386 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
CHMP24386 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
CHMP24386 AC120045.2-201ENST00000567334 178 ntBASIC14.04□□□□□ -0.16
CHMP24386 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.04□□□□□ -0.16
CHMP24386 AC093813.1-201ENST00000605066 256 ntBASIC14.04□□□□□ -0.16
CHMP24386 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.04□□□□□ -0.16
CHMP24386 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
CHMP24386 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHMP24386 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHMP24386 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHMP24386 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.04□□□□□ -0.16
CHMP24386 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CHMP24386 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHMP24386 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHMP24386 AC079781.5-202ENST00000641784 3743 ntBASIC14.04□□□□□ -0.16
CHMP24386 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHMP24386 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHMP24386 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHMP24386 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.04□□□□□ -0.16
CHMP24386 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHMP24386 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHMP24386 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHMP24386 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHMP24386 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CHMP24386 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHMP24386 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHMP24386 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHMP24386 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.03□□□□□ -0.16
CHMP24386 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHMP24386 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CHMP24386 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CHMP24386 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
CHMP24386 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.03□□□□□ -0.16
CHMP24386 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHMP24386 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHMP24386 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
CHMP24386 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.03□□□□□ -0.16
CHMP24386 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CHMP24386 VDAC1P7-201ENST00000462417 847 ntBASIC14.03□□□□□ -0.16
CHMP24386 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.03□□□□□ -0.16
CHMP24386 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.03□□□□□ -0.16
CHMP24386 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.03□□□□□ -0.16
CHMP24386 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.03□□□□□ -0.16
CHMP24386 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.03□□□□□ -0.16
CHMP24386 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CHMP24386 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.03□□□□□ -0.16
CHMP24386 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.03□□□□□ -0.16
CHMP24386 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.03□□□□□ -0.16
CHMP24386 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.03□□□□□ -0.16
CHMP24386 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.03□□□□□ -0.16
CHMP24386 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.03□□□□□ -0.16
CHMP24386 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHMP24386 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHMP24386 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHMP24386 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms