Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATF1P18846 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.18□□□□□ -0.3
ATF1P18846 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATF1P18846 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.18□□□□□ -0.3
ATF1P18846 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATF1P18846 AGGF1P1-201ENST00000509500 2073 ntBASIC13.18□□□□□ -0.3
ATF1P18846 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.18□□□□□ -0.3
ATF1P18846 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATF1P18846 AC107890.1-201ENST00000422478 521 ntBASIC13.18□□□□□ -0.3
ATF1P18846 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.18□□□□□ -0.3
ATF1P18846 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.18□□□□□ -0.3
ATF1P18846 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.18□□□□□ -0.3
ATF1P18846 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.18□□□□□ -0.3
ATF1P18846 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.18□□□□□ -0.3
ATF1P18846 AC004066.1-201ENST00000502488 802 ntBASIC13.18□□□□□ -0.3
ATF1P18846 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.18□□□□□ -0.3
ATF1P18846 ZNF890P-202ENST00000530367 1156 ntBASIC13.18□□□□□ -0.3
ATF1P18846 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATF1P18846 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.18□□□□□ -0.3
ATF1P18846 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
ATF1P18846 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATF1P18846 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATF1P18846 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
ATF1P18846 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
ATF1P18846 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATF1P18846 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.18□□□□□ -0.3
ATF1P18846 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATF1P18846 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATF1P18846 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATF1P18846 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATF1P18846 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATF1P18846 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATF1P18846 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATF1P18846 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
ATF1P18846 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATF1P18846 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATF1P18846 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.18□□□□□ -0.3
ATF1P18846 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATF1P18846 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ATF1P18846 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.17□□□□□ -0.3
ATF1P18846 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.17□□□□□ -0.3
ATF1P18846 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ATF1P18846 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ATF1P18846 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ATF1P18846 AC012617.1-204ENST00000586340 2305 ntBASIC13.17□□□□□ -0.3
ATF1P18846 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
ATF1P18846 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.17□□□□□ -0.3
ATF1P18846 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.17□□□□□ -0.3
ATF1P18846 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ATF1P18846 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.17□□□□□ -0.3
ATF1P18846 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATF1P18846 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ATF1P18846 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.17□□□□□ -0.3
ATF1P18846 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ATF1P18846 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.17□□□□□ -0.3
ATF1P18846 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATF1P18846 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.17□□□□□ -0.3
ATF1P18846 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.17□□□□□ -0.3
ATF1P18846 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.17□□□□□ -0.3
ATF1P18846 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.17□□□□□ -0.3
ATF1P18846 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.17□□□□□ -0.3
ATF1P18846 TMEM198B-204ENST00000484016 896 ntBASIC13.17□□□□□ -0.3
ATF1P18846 AC067863.1-201ENST00000494933 530 ntBASIC13.17□□□□□ -0.3
ATF1P18846 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.17□□□□□ -0.3
ATF1P18846 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.17□□□□□ -0.3
ATF1P18846 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ATF1P18846 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ATF1P18846 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.17□□□□□ -0.3
ATF1P18846 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.17□□□□□ -0.3
ATF1P18846 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATF1P18846 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.17□□□□□ -0.3
ATF1P18846 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
ATF1P18846 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.17□□□□□ -0.3
ATF1P18846 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.17□□□□□ -0.3
ATF1P18846 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.17□□□□□ -0.3
ATF1P18846 AC015911.4-201ENST00000588022 1070 ntBASIC13.17□□□□□ -0.3
ATF1P18846 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.17□□□□□ -0.3
ATF1P18846 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.17□□□□□ -0.3
ATF1P18846 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.17□□□□□ -0.3
ATF1P18846 AL844908.2-201ENST00000609461 460 ntBASIC13.17□□□□□ -0.3
ATF1P18846 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.17□□□□□ -0.3
ATF1P18846 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.17□□□□□ -0.3
ATF1P18846 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.17□□□□□ -0.3
ATF1P18846 AC079781.4-201ENST00000641908 219 ntBASIC13.17□□□□□ -0.3
ATF1P18846 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATF1P18846 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATF1P18846 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATF1P18846 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ATF1P18846 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATF1P18846 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATF1P18846 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ATF1P18846 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATF1P18846 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ATF1P18846 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATF1P18846 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATF1P18846 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATF1P18846 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATF1P18846 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ATF1P18846 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATF1P18846 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms