Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DOBP13765 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
HLA-DOBP13765 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.43□□□□□ -0.26
HLA-DOBP13765 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
HLA-DOBP13765 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DOBP13765 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.43□□□□□ -0.26
HLA-DOBP13765 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DOBP13765 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DOBP13765 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
HLA-DOBP13765 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DOBP13765 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.43□□□□□ -0.26
HLA-DOBP13765 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.43□□□□□ -0.26
HLA-DOBP13765 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DOBP13765 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.43□□□□□ -0.26
HLA-DOBP13765 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DOBP13765 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DOBP13765 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DOBP13765 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DOBP13765 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
HLA-DOBP13765 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DOBP13765 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DOBP13765 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
HLA-DOBP13765 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DOBP13765 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DOBP13765 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
HLA-DOBP13765 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DOBP13765 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.42□□□□□ -0.26
HLA-DOBP13765 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DOBP13765 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DOBP13765 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.42□□□□□ -0.26
HLA-DOBP13765 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
HLA-DOBP13765 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DOBP13765 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
HLA-DOBP13765 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DOBP13765 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DOBP13765 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DOBP13765 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
HLA-DOBP13765 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DOBP13765 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.42□□□□□ -0.26
HLA-DOBP13765 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
HLA-DOBP13765 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.42□□□□□ -0.26
HLA-DOBP13765 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DOBP13765 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.42□□□□□ -0.26
HLA-DOBP13765 TMEM14DP-201ENST00000422205 345 ntBASIC13.42□□□□□ -0.26
HLA-DOBP13765 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
HLA-DOBP13765 AC011495.1-201ENST00000498085 584 ntBASIC13.42□□□□□ -0.26
HLA-DOBP13765 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.42□□□□□ -0.26
HLA-DOBP13765 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.42□□□□□ -0.26
HLA-DOBP13765 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
HLA-DOBP13765 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.42□□□□□ -0.26
HLA-DOBP13765 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
HLA-DOBP13765 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
HLA-DOBP13765 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
HLA-DOBP13765 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
HLA-DOBP13765 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.42□□□□□ -0.26
HLA-DOBP13765 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
HLA-DOBP13765 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
HLA-DOBP13765 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.42□□□□□ -0.26
HLA-DOBP13765 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DOBP13765 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.42□□□□□ -0.26
HLA-DOBP13765 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.42□□□□□ -0.26
HLA-DOBP13765 AL603764.1-201ENST00000636452 321 ntBASIC13.42□□□□□ -0.26
HLA-DOBP13765 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.42□□□□□ -0.26
HLA-DOBP13765 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DOBP13765 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
HLA-DOBP13765 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DOBP13765 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.42□□□□□ -0.26
HLA-DOBP13765 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DOBP13765 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
HLA-DOBP13765 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DOBP13765 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DOBP13765 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.42□□□□□ -0.26
HLA-DOBP13765 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DOBP13765 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.42□□□□□ -0.26
HLA-DOBP13765 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DOBP13765 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DOBP13765 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
HLA-DOBP13765 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DOBP13765 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
HLA-DOBP13765 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DOBP13765 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
HLA-DOBP13765 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DOBP13765 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.41□□□□□ -0.26
HLA-DOBP13765 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.41□□□□□ -0.26
HLA-DOBP13765 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DOBP13765 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DOBP13765 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.41□□□□□ -0.26
HLA-DOBP13765 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.41□□□□□ -0.26
HLA-DOBP13765 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DOBP13765 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DOBP13765 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DOBP13765 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DOBP13765 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.41□□□□□ -0.26
HLA-DOBP13765 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.41□□□□□ -0.26
HLA-DOBP13765 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.41□□□□□ -0.26
HLA-DOBP13765 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DOBP13765 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.41□□□□□ -0.26
HLA-DOBP13765 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DOBP13765 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
HLA-DOBP13765 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms