Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UBCP0CG48 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBCP0CG48 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.19□□□□□ -0.3
UBCP0CG48 NUS1P3-201ENST00000423502 862 ntBASIC13.19□□□□□ -0.3
UBCP0CG48 HLA-K-203ENST00000430151 1046 ntBASIC13.19□□□□□ -0.3
UBCP0CG48 AC092580.3-201ENST00000430932 139 ntBASIC13.19□□□□□ -0.3
UBCP0CG48 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.19□□□□□ -0.3
UBCP0CG48 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.19□□□□□ -0.3
UBCP0CG48 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.19□□□□□ -0.3
UBCP0CG48 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
UBCP0CG48 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
UBCP0CG48 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.19□□□□□ -0.3
UBCP0CG48 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.19□□□□□ -0.3
UBCP0CG48 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
UBCP0CG48 AL391069.4-201ENST00000609583 481 ntBASIC13.19□□□□□ -0.3
UBCP0CG48 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.19□□□□□ -0.3
UBCP0CG48 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
UBCP0CG48 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBCP0CG48 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBCP0CG48 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
UBCP0CG48 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBCP0CG48 AC023090.2-201ENST00000625182 2110 ntBASIC13.19□□□□□ -0.3
UBCP0CG48 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UBCP0CG48 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.19□□□□□ -0.3
UBCP0CG48 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.19□□□□□ -0.3
UBCP0CG48 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBCP0CG48 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBCP0CG48 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.19□□□□□ -0.3
UBCP0CG48 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.19□□□□□ -0.3
UBCP0CG48 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.19□□□□□ -0.3
UBCP0CG48 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBCP0CG48 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
UBCP0CG48 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
UBCP0CG48 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBCP0CG48 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBCP0CG48 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.18□□□□□ -0.3
UBCP0CG48 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBCP0CG48 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBCP0CG48 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBCP0CG48 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBCP0CG48 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
UBCP0CG48 AC092135.3-201ENST00000624151 1846 ntBASIC13.18□□□□□ -0.3
UBCP0CG48 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBCP0CG48 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBCP0CG48 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBCP0CG48 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
UBCP0CG48 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBCP0CG48 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBCP0CG48 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
UBCP0CG48 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBCP0CG48 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBCP0CG48 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
UBCP0CG48 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBCP0CG48 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.18□□□□□ -0.3
UBCP0CG48 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
UBCP0CG48 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBCP0CG48 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
UBCP0CG48 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBCP0CG48 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBCP0CG48 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBCP0CG48 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.18□□□□□ -0.3
UBCP0CG48 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
UBCP0CG48 AC241585.1-201ENST00000433527 519 ntBASIC13.18□□□□□ -0.3
UBCP0CG48 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.18□□□□□ -0.3
UBCP0CG48 AC097493.3-201ENST00000509725 367 ntBASIC13.18□□□□□ -0.3
UBCP0CG48 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.18□□□□□ -0.3
UBCP0CG48 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.18□□□□□ -0.3
UBCP0CG48 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.18□□□□□ -0.3
UBCP0CG48 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
UBCP0CG48 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBCP0CG48 AC107373.2-201ENST00000607735 490 ntBASIC13.18□□□□□ -0.3
UBCP0CG48 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.18□□□□□ -0.3
UBCP0CG48 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBCP0CG48 AL590560.3-201ENST00000623350 461 ntBASIC13.18□□□□□ -0.3
UBCP0CG48 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBCP0CG48 DRD5P1-201ENST00000456605 1438 ntBASIC13.18□□□□□ -0.3
UBCP0CG48 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBCP0CG48 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.18□□□□□ -0.3
UBCP0CG48 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBCP0CG48 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBCP0CG48 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
UBCP0CG48 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBCP0CG48 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBCP0CG48 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBCP0CG48 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBCP0CG48 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBCP0CG48 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
UBCP0CG48 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBCP0CG48 AL138799.1-201ENST00000448213 1675 ntBASIC13.18□□□□□ -0.3
UBCP0CG48 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.18□□□□□ -0.3
UBCP0CG48 AL354702.1-201ENST00000442006 1960 ntBASIC13.18□□□□□ -0.3
UBCP0CG48 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBCP0CG48 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBCP0CG48 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBCP0CG48 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBCP0CG48 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
UBCP0CG48 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBCP0CG48 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBCP0CG48 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UBCP0CG48 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms