Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD48P09326 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CD48P09326 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.47■□□□□ 0.07
CD48P09326 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD48P09326 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.47■□□□□ 0.07
CD48P09326 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CD48P09326 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CD48P09326 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD48P09326 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD48P09326 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD48P09326 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD48P09326 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD48P09326 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CD48P09326 AC098614.1-201ENST00000368528 745 ntBASIC15.47■□□□□ 0.07
CD48P09326 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD48P09326 TLE1P1-201ENST00000422965 589 ntBASIC15.47■□□□□ 0.07
CD48P09326 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.47■□□□□ 0.07
CD48P09326 AC245100.3-201ENST00000441281 285 ntBASIC15.47■□□□□ 0.07
CD48P09326 AL391280.1-201ENST00000506969 1062 ntBASIC15.47■□□□□ 0.07
CD48P09326 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD48P09326 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD48P09326 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.47■□□□□ 0.07
CD48P09326 AL596325.1-201ENST00000563991 1082 ntBASIC15.47■□□□□ 0.07
CD48P09326 AC012617.1-204ENST00000586340 2305 ntBASIC15.47■□□□□ 0.07
CD48P09326 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
CD48P09326 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CD48P09326 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD48P09326 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD48P09326 FLJ16779-201ENST00000612722 7638 ntBASIC15.47■□□□□ 0.07
CD48P09326 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD48P09326 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CD48P09326 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CD48P09326 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CD48P09326 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CD48P09326 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CD48P09326 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.47■□□□□ 0.07
CD48P09326 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD48P09326 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CD48P09326 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD48P09326 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD48P09326 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.46■□□□□ 0.07
CD48P09326 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CD48P09326 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CD48P09326 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CD48P09326 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD48P09326 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD48P09326 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CD48P09326 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD48P09326 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CD48P09326 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.46■□□□□ 0.07
CD48P09326 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD48P09326 C8orf49-201ENST00000525043 1968 ntBASIC15.46■□□□□ 0.07
CD48P09326 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD48P09326 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD48P09326 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.46■□□□□ 0.07
CD48P09326 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.46■□□□□ 0.07
CD48P09326 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.46■□□□□ 0.07
CD48P09326 MESTP3-201ENST00000503460 968 ntBASIC15.46■□□□□ 0.07
CD48P09326 USP32P1-208ENST00000506594 1164 ntBASIC15.46■□□□□ 0.07
CD48P09326 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.46■□□□□ 0.07
CD48P09326 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.46■□□□□ 0.07
CD48P09326 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.46■□□□□ 0.07
CD48P09326 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.46■□□□□ 0.07
CD48P09326 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.46■□□□□ 0.07
CD48P09326 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.46■□□□□ 0.07
CD48P09326 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CD48P09326 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CD48P09326 AC008735.3-201ENST00000596646 500 ntBASIC15.46■□□□□ 0.07
CD48P09326 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.46■□□□□ 0.07
CD48P09326 AC138696.2-201ENST00000607376 223 ntBASIC15.46■□□□□ 0.07
CD48P09326 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
CD48P09326 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CD48P09326 AC009093.2-202ENST00000620513 2079 ntBASIC15.46■□□□□ 0.07
CD48P09326 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
CD48P09326 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD48P09326 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD48P09326 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CD48P09326 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CD48P09326 AL136172.1-201ENST00000598590 1394 ntBASIC15.46■□□□□ 0.07
CD48P09326 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD48P09326 AC152010.1-201ENST00000415779 2006 ntBASIC15.46■□□□□ 0.07
CD48P09326 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CD48P09326 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.46■□□□□ 0.06
CD48P09326 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CD48P09326 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
CD48P09326 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CD48P09326 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CD48P09326 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CD48P09326 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
CD48P09326 AC092135.3-201ENST00000624151 1846 ntBASIC15.45■□□□□ 0.06
CD48P09326 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.45■□□□□ 0.06
CD48P09326 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.45■□□□□ 0.06
CD48P09326 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CD48P09326 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CD48P09326 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CD48P09326 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CD48P09326 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.45■□□□□ 0.06
CD48P09326 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
CD48P09326 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CD48P09326 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms