Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AL162726.2-201ENST00000438986 1017 ntBASIC14.8□□□□□ -0.04
CAPN1P07384 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.8□□□□□ -0.04
CAPN1P07384 CROCCP4-201ENST00000457096 498 ntBASIC14.8□□□□□ -0.04
CAPN1P07384 AC004066.1-201ENST00000502488 802 ntBASIC14.8□□□□□ -0.04
CAPN1P07384 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.8□□□□□ -0.04
CAPN1P07384 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.8□□□□□ -0.04
CAPN1P07384 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CAPN1P07384 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.8□□□□□ -0.04
CAPN1P07384 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.8□□□□□ -0.04
CAPN1P07384 SNX29P1-201ENST00000548357 1007 ntBASIC14.8□□□□□ -0.04
CAPN1P07384 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.8□□□□□ -0.04
CAPN1P07384 AC124283.3-201ENST00000570869 594 ntBASIC14.8□□□□□ -0.04
CAPN1P07384 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.8□□□□□ -0.04
CAPN1P07384 BTNL10-201ENST00000595971 695 ntBASIC14.8□□□□□ -0.04
CAPN1P07384 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.8□□□□□ -0.04
CAPN1P07384 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.8□□□□□ -0.04
CAPN1P07384 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN1P07384 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
CAPN1P07384 AL360270.3-201ENST00000609118 1348 ntBASIC14.8□□□□□ -0.04
CAPN1P07384 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.8□□□□□ -0.04
CAPN1P07384 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CAPN1P07384 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CAPN1P07384 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN1P07384 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN1P07384 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CAPN1P07384 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN1P07384 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.8□□□□□ -0.04
CAPN1P07384 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN1P07384 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN1P07384 AL157414.3-201ENST00000624276 1954 ntBASIC14.8□□□□□ -0.04
CAPN1P07384 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN1P07384 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CAPN1P07384 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.8□□□□□ -0.04
CAPN1P07384 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN1P07384 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CAPN1P07384 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CAPN1P07384 AC087386.2-201ENST00000623212 4637 ntBASIC14.8□□□□□ -0.04
CAPN1P07384 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.8□□□□□ -0.04
CAPN1P07384 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN1P07384 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CAPN1P07384 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CAPN1P07384 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.79□□□□□ -0.04
CAPN1P07384 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CAPN1P07384 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CAPN1P07384 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CAPN1P07384 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CAPN1P07384 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CAPN1P07384 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CAPN1P07384 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CAPN1P07384 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CAPN1P07384 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CAPN1P07384 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CAPN1P07384 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CAPN1P07384 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
CAPN1P07384 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CAPN1P07384 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CAPN1P07384 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.79□□□□□ -0.04
CAPN1P07384 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CAPN1P07384 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CAPN1P07384 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
CAPN1P07384 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
CAPN1P07384 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.79□□□□□ -0.04
CAPN1P07384 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CAPN1P07384 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CAPN1P07384 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.79□□□□□ -0.04
CAPN1P07384 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
CAPN1P07384 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CAPN1P07384 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.79□□□□□ -0.04
CAPN1P07384 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.79□□□□□ -0.04
CAPN1P07384 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.79□□□□□ -0.04
CAPN1P07384 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.79□□□□□ -0.04
CAPN1P07384 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CAPN1P07384 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.79□□□□□ -0.04
CAPN1P07384 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CAPN1P07384 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.79□□□□□ -0.04
CAPN1P07384 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.79□□□□□ -0.04
CAPN1P07384 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.79□□□□□ -0.04
CAPN1P07384 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.79□□□□□ -0.04
CAPN1P07384 CU634019.7-201ENST00000624153 1185 ntBASIC14.79□□□□□ -0.04
CAPN1P07384 FP236241.2-201ENST00000624906 1185 ntBASIC14.79□□□□□ -0.04
CAPN1P07384 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CAPN1P07384 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CAPN1P07384 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.79□□□□□ -0.04
CAPN1P07384 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN1P07384 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN1P07384 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN1P07384 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN1P07384 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CAPN1P07384 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN1P07384 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CAPN1P07384 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.78□□□□□ -0.04
CAPN1P07384 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN1P07384 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN1P07384 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN1P07384 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN1P07384 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN1P07384 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.78□□□□□ -0.04
CAPN1P07384 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN1P07384 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN1P07384 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms