Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 ALG1L5P-201ENST00000482043 771 ntBASIC12.46□□□□□ -0.41
CTSDP07339 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC12.46□□□□□ -0.41
CTSDP07339 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.46□□□□□ -0.41
CTSDP07339 AC010327.4-202ENST00000591484 748 ntBASIC12.46□□□□□ -0.41
CTSDP07339 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC12.46□□□□□ -0.41
CTSDP07339 AC022145.2-201ENST00000598203 171 ntBASIC12.46□□□□□ -0.41
CTSDP07339 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.46□□□□□ -0.41
CTSDP07339 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.46□□□□□ -0.41
CTSDP07339 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.46□□□□□ -0.41
CTSDP07339 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.46□□□□□ -0.41
CTSDP07339 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CTSDP07339 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CTSDP07339 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.46□□□□□ -0.42
CTSDP07339 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CTSDP07339 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.46□□□□□ -0.42
CTSDP07339 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CTSDP07339 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.46□□□□□ -0.42
CTSDP07339 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CTSDP07339 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
CTSDP07339 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CTSDP07339 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CTSDP07339 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CTSDP07339 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CTSDP07339 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CTSDP07339 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
CTSDP07339 RN7SL832P-201ENST00000607781 1756 ntBASIC12.46□□□□□ -0.42
CTSDP07339 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.46□□□□□ -0.42
CTSDP07339 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.45□□□□□ -0.42
CTSDP07339 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.45□□□□□ -0.42
CTSDP07339 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.45□□□□□ -0.42
CTSDP07339 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.45□□□□□ -0.42
CTSDP07339 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.45□□□□□ -0.42
CTSDP07339 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 AC023794.5-201ENST00000564380 2157 ntBASIC12.45□□□□□ -0.42
CTSDP07339 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.45□□□□□ -0.42
CTSDP07339 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 AC073548.1-201ENST00000624088 1882 ntBASIC12.45□□□□□ -0.42
CTSDP07339 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.45□□□□□ -0.42
CTSDP07339 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.45□□□□□ -0.42
CTSDP07339 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CTSDP07339 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CTSDP07339 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.45□□□□□ -0.42
CTSDP07339 RBPMS2P1-201ENST00000437762 623 ntBASIC12.45□□□□□ -0.42
CTSDP07339 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 SPDYE14P-201ENST00000442619 822 ntBASIC12.45□□□□□ -0.42
CTSDP07339 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.45□□□□□ -0.42
CTSDP07339 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC12.45□□□□□ -0.42
CTSDP07339 AC005829.1-201ENST00000570002 483 ntBASIC12.45□□□□□ -0.42
CTSDP07339 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
CTSDP07339 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
CTSDP07339 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CTSDP07339 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.45□□□□□ -0.42
CTSDP07339 AC105339.1-204ENST00000636249 355 ntBASIC12.45□□□□□ -0.42
CTSDP07339 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.45□□□□□ -0.42
CTSDP07339 AC011840.2-201ENST00000563063 1520 ntBASIC12.45□□□□□ -0.42
CTSDP07339 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.45□□□□□ -0.42
CTSDP07339 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.45□□□□□ -0.42
CTSDP07339 CICP20-201ENST00000443330 2801 ntBASIC12.45□□□□□ -0.42
CTSDP07339 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
CTSDP07339 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CTSDP07339 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CTSDP07339 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 DGCR9-201ENST00000609630 2415 ntBASIC12.45□□□□□ -0.42
CTSDP07339 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CTSDP07339 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTSDP07339 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTSDP07339 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms