Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.16□□□□□ -0.14
SNX4O95219 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX4O95219 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX4O95219 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SNX4O95219 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX4O95219 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.16□□□□□ -0.14
SNX4O95219 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX4O95219 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX4O95219 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX4O95219 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX4O95219 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX4O95219 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SNX4O95219 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SNX4O95219 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SNX4O95219 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.16□□□□□ -0.14
SNX4O95219 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
SNX4O95219 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
SNX4O95219 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SNX4O95219 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX4O95219 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SNX4O95219 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.16□□□□□ -0.14
SNX4O95219 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
SNX4O95219 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SNX4O95219 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SNX4O95219 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SNX4O95219 AC025181.2-201ENST00000606994 802 ntBASIC14.16□□□□□ -0.14
SNX4O95219 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.16□□□□□ -0.14
SNX4O95219 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.16□□□□□ -0.14
SNX4O95219 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.16□□□□□ -0.14
SNX4O95219 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.16□□□□□ -0.14
SNX4O95219 AL645728.2-202ENST00000641679 227 ntBASIC14.16□□□□□ -0.14
SNX4O95219 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SNX4O95219 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SNX4O95219 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SNX4O95219 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.16□□□□□ -0.14
SNX4O95219 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SNX4O95219 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.16□□□□□ -0.14
SNX4O95219 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.16□□□□□ -0.14
SNX4O95219 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX4O95219 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX4O95219 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.15□□□□□ -0.14
SNX4O95219 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX4O95219 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX4O95219 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX4O95219 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.15□□□□□ -0.14
SNX4O95219 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX4O95219 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.15□□□□□ -0.14
SNX4O95219 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SNX4O95219 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SNX4O95219 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX4O95219 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX4O95219 LINC01230-201ENST00000625222 3017 ntBASIC14.15□□□□□ -0.14
SNX4O95219 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX4O95219 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SNX4O95219 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX4O95219 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX4O95219 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX4O95219 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX4O95219 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX4O95219 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX4O95219 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SNX4O95219 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.15□□□□□ -0.14
SNX4O95219 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX4O95219 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX4O95219 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.15□□□□□ -0.14
SNX4O95219 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
SNX4O95219 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.15□□□□□ -0.14
SNX4O95219 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX4O95219 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.15□□□□□ -0.14
SNX4O95219 ACTG1P3-201ENST00000431775 1114 ntBASIC14.15□□□□□ -0.14
SNX4O95219 TTTY23B-201ENST00000442790 549 ntBASIC14.15□□□□□ -0.14
SNX4O95219 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.15□□□□□ -0.14
SNX4O95219 GAPDHP40-201ENST00000505218 1006 ntBASIC14.15□□□□□ -0.14
SNX4O95219 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.15□□□□□ -0.14
SNX4O95219 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.15□□□□□ -0.14
SNX4O95219 AC009486.1-201ENST00000569860 813 ntBASIC14.15□□□□□ -0.14
SNX4O95219 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.15□□□□□ -0.14
SNX4O95219 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.15□□□□□ -0.14
SNX4O95219 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.15□□□□□ -0.14
SNX4O95219 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SNX4O95219 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.15□□□□□ -0.14
SNX4O95219 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
SNX4O95219 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.15□□□□□ -0.14
SNX4O95219 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.15□□□□□ -0.14
SNX4O95219 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.15□□□□□ -0.14
SNX4O95219 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SNX4O95219 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SNX4O95219 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SNX4O95219 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SNX4O95219 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SNX4O95219 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX4O95219 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.15□□□□□ -0.14
SNX4O95219 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.15□□□□□ -0.14
SNX4O95219 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX4O95219 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX4O95219 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX4O95219 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
SNX4O95219 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX4O95219 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SNX4O95219 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms