Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSPG5O95196 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
CSPG5O95196 AC126177.1-201ENST00000547829 2218 ntBASIC16.08■□□□□ 0.16
CSPG5O95196 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSPG5O95196 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSPG5O95196 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSPG5O95196 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSPG5O95196 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.08■□□□□ 0.16
CSPG5O95196 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSPG5O95196 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CSPG5O95196 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.08■□□□□ 0.16
CSPG5O95196 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
CSPG5O95196 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CSPG5O95196 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSPG5O95196 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.08■□□□□ 0.16
CSPG5O95196 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSPG5O95196 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.08■□□□□ 0.16
CSPG5O95196 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CSPG5O95196 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CSPG5O95196 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CSPG5O95196 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG5O95196 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.07■□□□□ 0.16
CSPG5O95196 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.07■□□□□ 0.16
CSPG5O95196 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.07■□□□□ 0.16
CSPG5O95196 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG5O95196 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG5O95196 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG5O95196 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG5O95196 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG5O95196 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CSPG5O95196 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG5O95196 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CSPG5O95196 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
CSPG5O95196 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG5O95196 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG5O95196 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG5O95196 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.07■□□□□ 0.16
CSPG5O95196 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.07■□□□□ 0.16
CSPG5O95196 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.07■□□□□ 0.16
CSPG5O95196 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG5O95196 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.07■□□□□ 0.16
CSPG5O95196 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC16.07■□□□□ 0.16
CSPG5O95196 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.07■□□□□ 0.16
CSPG5O95196 AC090164.2-201ENST00000611487 516 ntBASIC16.07■□□□□ 0.16
CSPG5O95196 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.07■□□□□ 0.16
CSPG5O95196 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG5O95196 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG5O95196 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG5O95196 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.07■□□□□ 0.16
CSPG5O95196 MTHFR-217ENST00000641820 1569 ntBASIC16.07■□□□□ 0.16
CSPG5O95196 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.07■□□□□ 0.16
CSPG5O95196 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG5O95196 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG5O95196 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG5O95196 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CSPG5O95196 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
CSPG5O95196 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG5O95196 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG5O95196 C8orf49-201ENST00000525043 1968 ntBASIC16.07■□□□□ 0.16
CSPG5O95196 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG5O95196 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG5O95196 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG5O95196 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.07■□□□□ 0.16
CSPG5O95196 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG5O95196 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG5O95196 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.07■□□□□ 0.16
CSPG5O95196 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
CSPG5O95196 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG5O95196 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG5O95196 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.06■□□□□ 0.16
CSPG5O95196 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.06■□□□□ 0.16
CSPG5O95196 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG5O95196 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG5O95196 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.06■□□□□ 0.16
CSPG5O95196 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.06■□□□□ 0.16
CSPG5O95196 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG5O95196 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CSPG5O95196 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG5O95196 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG5O95196 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG5O95196 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG5O95196 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
CSPG5O95196 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CSPG5O95196 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CSPG5O95196 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG5O95196 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
CSPG5O95196 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG5O95196 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG5O95196 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG5O95196 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG5O95196 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG5O95196 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.06■□□□□ 0.16
CSPG5O95196 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.06■□□□□ 0.16
CSPG5O95196 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG5O95196 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC16.06■□□□□ 0.16
CSPG5O95196 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.06■□□□□ 0.16
CSPG5O95196 AC103988.2-201ENST00000561804 725 ntBASIC16.06■□□□□ 0.16
CSPG5O95196 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG5O95196 MIR4783-201ENST00000580343 82 ntBASIC16.06■□□□□ 0.16
CSPG5O95196 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms