Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC13.02□□□□□ -0.33
UPK1BO75841 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
UPK1BO75841 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
UPK1BO75841 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
UPK1BO75841 PCDHB19P-202ENST00000625133 2914 ntBASIC13.02□□□□□ -0.33
UPK1BO75841 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UPK1BO75841 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
UPK1BO75841 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
UPK1BO75841 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UPK1BO75841 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
UPK1BO75841 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UPK1BO75841 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
UPK1BO75841 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.01□□□□□ -0.33
UPK1BO75841 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
UPK1BO75841 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC13.01□□□□□ -0.33
UPK1BO75841 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
UPK1BO75841 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
UPK1BO75841 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK1BO75841 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UPK1BO75841 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK1BO75841 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.01□□□□□ -0.33
UPK1BO75841 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK1BO75841 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK1BO75841 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
UPK1BO75841 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK1BO75841 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK1BO75841 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UPK1BO75841 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UPK1BO75841 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UPK1BO75841 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
UPK1BO75841 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UPK1BO75841 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
UPK1BO75841 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.01□□□□□ -0.33
UPK1BO75841 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.01□□□□□ -0.33
UPK1BO75841 AK4P3-201ENST00000418260 669 ntBASIC13.01□□□□□ -0.33
UPK1BO75841 DAP-202ENST00000432074 1048 ntTSL 2 BASIC13.01□□□□□ -0.33
UPK1BO75841 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.01□□□□□ -0.33
UPK1BO75841 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.01□□□□□ -0.33
UPK1BO75841 AL513480.1-201ENST00000451731 511 ntBASIC13.01□□□□□ -0.33
UPK1BO75841 AL139010.1-201ENST00000454878 894 ntBASIC13.01□□□□□ -0.33
UPK1BO75841 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC13.01□□□□□ -0.33
UPK1BO75841 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC13.01□□□□□ -0.33
UPK1BO75841 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.01□□□□□ -0.33
UPK1BO75841 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.01□□□□□ -0.33
UPK1BO75841 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.01□□□□□ -0.33
UPK1BO75841 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC13.01□□□□□ -0.33
UPK1BO75841 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.01□□□□□ -0.33
UPK1BO75841 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK1BO75841 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.01□□□□□ -0.33
UPK1BO75841 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK1BO75841 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UPK1BO75841 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
UPK1BO75841 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC13.01□□□□□ -0.33
UPK1BO75841 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UPK1BO75841 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK1BO75841 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK1BO75841 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UPK1BO75841 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC13.01□□□□□ -0.33
UPK1BO75841 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK1BO75841 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UPK1BO75841 MYADML-201ENST00000474610 2147 ntBASIC13.01□□□□□ -0.33
UPK1BO75841 AC060814.4-201ENST00000594169 2163 ntBASIC13.01□□□□□ -0.33
UPK1BO75841 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK1BO75841 FAM90A11P-201ENST00000518378 2218 ntBASIC13.01□□□□□ -0.33
UPK1BO75841 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.01□□□□□ -0.33
UPK1BO75841 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
UPK1BO75841 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK1BO75841 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK1BO75841 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC13.01□□□□□ -0.33
UPK1BO75841 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.01□□□□□ -0.33
UPK1BO75841 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC13.01□□□□□ -0.33
UPK1BO75841 PCDHA6-201ENST00000378126 3267 ntBASIC13.01□□□□□ -0.33
UPK1BO75841 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UPK1BO75841 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK1BO75841 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK1BO75841 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC13□□□□□ -0.33
UPK1BO75841 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
UPK1BO75841 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
UPK1BO75841 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UPK1BO75841 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
UPK1BO75841 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
UPK1BO75841 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
UPK1BO75841 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13□□□□□ -0.33
UPK1BO75841 AC010970.1-201ENST00000445125 1848 ntBASIC13□□□□□ -0.33
UPK1BO75841 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC13□□□□□ -0.33
UPK1BO75841 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13□□□□□ -0.33
UPK1BO75841 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
UPK1BO75841 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13□□□□□ -0.33
UPK1BO75841 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13□□□□□ -0.33
UPK1BO75841 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13□□□□□ -0.33
UPK1BO75841 AL391647.1-201ENST00000395664 511 ntBASIC13□□□□□ -0.33
UPK1BO75841 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13□□□□□ -0.33
UPK1BO75841 LAGE3P1-201ENST00000425356 484 ntBASIC13□□□□□ -0.33
UPK1BO75841 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13□□□□□ -0.33
UPK1BO75841 AL137013.1-201ENST00000432946 1228 ntBASIC13□□□□□ -0.33
UPK1BO75841 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC13□□□□□ -0.33
UPK1BO75841 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC13□□□□□ -0.33
UPK1BO75841 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
UPK1BO75841 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13□□□□□ -0.33
UPK1BO75841 CXCL1P1-201ENST00000502804 216 ntBASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms